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SCNpilot_cont_300_bf_scaffold_421_curated_19

Organism: scnpilot_dereplicated_Variovorax_1

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: comp(28248..29717)

Top 3 Functional Annotations

Value Algorithm Source
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 64.3
  • Coverage: 465.0
  • Bit_score: 573
  • Evalue 3.30e-160
histidine kinase n=1 Tax=Variovorax paradoxus RepID=UPI00037370EB similarity UNIREF
DB: UNIREF100
  • Identity: 72.3
  • Coverage: 462.0
  • Bit_score: 670
  • Evalue 1.10e-189
integral membrane sensor signal transduction histidine kinase similarity KEGG
DB: KEGG
  • Identity: 49.2
  • Coverage: 459.0
  • Bit_score: 407
  • Evalue 5.30e-111

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Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1470
ATGAATCCTTTGCCAGTCGAGAACAACGCCGGCCCCGGCGCGAGCCCCGGCACGCGCCTGGGATGGGGAGGCGCGCTCAGGCGGCGGTGCCGGCGCTGGATGCAGCCTTCGCTCCTCAGGCGCCTGTTGCTGGTGCAGATCTCGGTGGTCGGGTTGCTGTGGACCTGCACCCTCGGCCTCTTCCTGTACGACTCCAATCGCTTTCCCGAGCTCGTGCGCTACGACAAGATCTTTGCCTGCGTCATCAGCGCCGCGCAGAACCTCGCGGCGTCGCCCGACCGCCAGCAGGCCACGCTGCGTGCCTTCGACATGGCGCTGCTCGAGACCTCGGGCGACTTTTCTTCCGAGGTGGACAAGGCGCCCGTCATGCAGGTGTGGCAGCGCGGCAAGCTCATCTACAACTCCTCCGCGTCGGTGCCGCCGATCATCAACCAGACCATCGGCAAGGTCGAGAGCATCAGGCTCGGCGACCGGTCGCTGCGCGCGCGGACCATGATTTCGCCGGTGCTCGACACCCGCGTGATGCTGGCAGAGCCCAAGTTCCTGCGGCTGTATTTCAACGTCGACCACCGCAGCTACTACTTCCTGCCGCTGCTCATCAGCCTGCCGTTCCTGGTGTTTCCCGCGTGGCTGGCCGTGCTGCTCGCGCTGCGGCCGTGGCGGCAGGTGACACGAGAGACCGCCGAGCGCGGCCCGGCCGACCTCACCCCGCTGTCGTTCGAGCCGCCGCACAAGGAACTGCGGCCGATGGTGCGCAGCATCAACGGCCTGCTGCGCAGCGTGCGCGACCGCGGCGCACGGGAGCGCGGGCTGATCGCCGACGCCGCCAACGAACTGCACACGCCGCTCGAGGCGATGCGCGTGAACGTCGAGGCGCTGAAGGCGCAGACCAACGACCGGGGCCAGCGTGAGCTCATGGCCAACCTGCTGCGCAGCAACGACCGCGCGACGCGGCTGGTGGGGCAGTTGCAGCAGCTGATGCGCAGCGACGAAATGCCGCAGGACGCGGTGCCCGAGCCGCTCGCGCTCGACGCGCTGGCACGCGAGCGCATCGCGCTGGTCGGGCCGCTGGCGCATGCACGCGGCGTGCGGTTCGACTTTGCCGTGGAAGACGGCCCGGTGCCGGTGTTCGGCGAGCGCGAGAGCCTGATCTCGATGCTGAGCAACCTGATCGAGAACGCCGTCAAGTACAGCCCCGACGGCGGCACGGTCAGGGTGCACGTCCGCCGCGAAGGCACGCGCGCGGTGCTGCGCGTGGCCGACGAGGGCCCGGGCATTCCGCCCGCGCTGCGCGAGCGGGTGTTCGACCGCTTCTTCCGCAATCCCGACCAGACGCAATCGGGCAGCGGCTTGGGGCTGGCCATCGTGAAGTCGGTGCTGGACAAGCACCATGGCCGGGTCGTGCTGGGCGAGGGCGAAGACGGCCGCGGCCTGCTGGCGACCGTGTGGCTGCCGTTGCCGGCGGGCTGA
PROTEIN sequence
Length: 490
MNPLPVENNAGPGASPGTRLGWGGALRRRCRRWMQPSLLRRLLLVQISVVGLLWTCTLGLFLYDSNRFPELVRYDKIFACVISAAQNLAASPDRQQATLRAFDMALLETSGDFSSEVDKAPVMQVWQRGKLIYNSSASVPPIINQTIGKVESIRLGDRSLRARTMISPVLDTRVMLAEPKFLRLYFNVDHRSYYFLPLLISLPFLVFPAWLAVLLALRPWRQVTRETAERGPADLTPLSFEPPHKELRPMVRSINGLLRSVRDRGARERGLIADAANELHTPLEAMRVNVEALKAQTNDRGQRELMANLLRSNDRATRLVGQLQQLMRSDEMPQDAVPEPLALDALARERIALVGPLAHARGVRFDFAVEDGPVPVFGERESLISMLSNLIENAVKYSPDGGTVRVHVRREGTRAVLRVADEGPGIPPALRERVFDRFFRNPDQTQSGSGLGLAIVKSVLDKHHGRVVLGEGEDGRGLLATVWLPLPAG*