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SCNpilot_cont_300_bf_scaffold_174_curated_7

Organism: scnpilot_dereplicated_Variovorax_1

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: 6120..7751

Top 3 Functional Annotations

Value Algorithm Source
ABC-type dipeptide transport system, periplasmic component n=1 Tax=Variovorax sp. CF313 RepID=J3CPB0_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 97.8
  • Coverage: 543.0
  • Bit_score: 1094
  • Evalue 0.0
ABC-type dipeptide transport system, periplasmic component {ECO:0000313|EMBL:EJL75779.1}; Flags: Precursor;; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 97.8
  • Coverage: 543.0
  • Bit_score: 1094
  • Evalue 0.0
family 5 extracellular solute-binding protein; K12368 dipeptide transport system substrate-binding protein similarity KEGG
DB: KEGG
  • Identity: 97.2
  • Coverage: 543.0
  • Bit_score: 1089
  • Evalue 0.0

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Taxonomy

Variovorax sp. CF313 → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1632
ATGAAGACCCAGTCCACCGTTTCGCGCCGCTCACGAAGCCTGGCGCTCCTGGCACCGACAGCGATTGCGGCCCTTACCCTGGCCTGCGGCGCCGTGTCAGCCAAGACGCTGGTGTATTGCTCGGAAGGCAGCCCGGAGAATTTCTATCCGGGCATGAACACCACCGGCACCTCGTTCGACGTGACCACGCAGGTCTACAACACCATCGTCGAGTTCGAGCGCGGCGGCACCAAGGTCGTGCCGGGCCTGGCCGAGAAGTGGGACATCTCCGCCGACGGCACGGTCTACACCTTCCATCTGCGCAAGGGCGTGAAGTGGCACACCACGAGCAAGAGCTTCAAGCCCACGCGCGACTTCAACGCCGACGACTTCATCTTCATGCTCGAGCGGCAGTGGAAGGAGAGCGACCCCTTCTTCAAGGTCACGAGCCAGAACCACTCCTACTTCAACGACATGGGCATGCCCAAGCTGCTGAAGACTGTGGACCGCATCGACGACTACACGGTGAAGATCGTGCTCAACCAGCCCGAGGCGCCGTTCCTCGCGAACCTGGCGATGCAGTACGCGGGCATCCAGTCGAAGGAATACGCCATTGCCATGCTGAAGGCCGGCACGCCCGAGAAGGTCGACCAGGACCCGATCGGCACCGGGCCCTTCTACCTCGTGCAGTACCAGAAGGACGCGGTCATCCGCTTCAAGGCCTTCCCGCAGTACTGGGGCGGCAAGGCCAAGATCGACGACCTGGTGTTCGCGATCACGCCCGATGCCTCGGTGCGCTGGGCCAAGCTGCAAAAGGGCGAGTGCCACGTCATGCCGTACCCGAACCCGGCCGACCTCGACGCGATCCGCAAGGACCCGAACGTGCAGGTGCTGGAGCAGCCCGGCCTGAACGTGGGCTACCTCTCGTACAACACCACGAAGAAGCCCTTCGACGACGTGCGCGTGCGCAAGGCCATCAACATGGCGATCAACAAGAAGGCCATCATCGACGGCGTGTACCTCACGACCGGCGTGGCCGCGAAGAACCCGATTCCGCCGACCATGTGGTCCTACAACGACGCGGTGAAGGACGACCCCTACGATCCCGAAGCCGCGAAGAAGCTGCTGGCGCAGGCCGGCTACCCCGACGGCTTCTCGACCGACCTGTGGGCCATGCCGGTGCAGCGCCCGTACAACCCGAACGCCAAGCGCATCGCCGAGCTGATGCAGGCCGACCTGGCCAAGATCAACGTCAAGGCCGAGATCAAGAGCTTCGAGTGGGGCGAGTACCGCAAGCGCCTGCAGGCCGGCGAGCACCAGATGGGCATGCTGGGCTGGACCGGCGACAACGGCGATCCGGACAACTTCCTCTACACGCTGCTGGGCTGCGCCTCGGCCAAGTCGGCCAGCGGCAGCAACATCTCGAAGTTCTGCTACCAGCCTTATGAAGACCTCGTGGTGAAGGCCAAGAGCACCGTGAAGCAGGCCGACCGCGATGCGCTCTACAAGAAGGCGCAGGTGATCTTCAAGGAGCAGGCGCCGTGGTTCACCATCGCGCATGCGGTGCAGCTGAAGCCGGTGCGCAAGGAGGTCGTAGACTTCAAGCTCAGCCCCTTCGGGCGCCACACGTTCTACGGCGTGGATATCAAGTAA
PROTEIN sequence
Length: 544
MKTQSTVSRRSRSLALLAPTAIAALTLACGAVSAKTLVYCSEGSPENFYPGMNTTGTSFDVTTQVYNTIVEFERGGTKVVPGLAEKWDISADGTVYTFHLRKGVKWHTTSKSFKPTRDFNADDFIFMLERQWKESDPFFKVTSQNHSYFNDMGMPKLLKTVDRIDDYTVKIVLNQPEAPFLANLAMQYAGIQSKEYAIAMLKAGTPEKVDQDPIGTGPFYLVQYQKDAVIRFKAFPQYWGGKAKIDDLVFAITPDASVRWAKLQKGECHVMPYPNPADLDAIRKDPNVQVLEQPGLNVGYLSYNTTKKPFDDVRVRKAINMAINKKAIIDGVYLTTGVAAKNPIPPTMWSYNDAVKDDPYDPEAAKKLLAQAGYPDGFSTDLWAMPVQRPYNPNAKRIAELMQADLAKINVKAEIKSFEWGEYRKRLQAGEHQMGMLGWTGDNGDPDNFLYTLLGCASAKSASGSNISKFCYQPYEDLVVKAKSTVKQADRDALYKKAQVIFKEQAPWFTIAHAVQLKPVRKEVVDFKLSPFGRHTFYGVDIK*