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SCNpilot_cont_300_bf_scaffold_174_curated_24

Organism: scnpilot_dereplicated_Variovorax_1

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: comp(23992..26094)

Top 3 Functional Annotations

Value Algorithm Source
Glycogen operon protein GlgX homolog {ECO:0000256|SAAS:SAAS00046872}; EC=3.2.1.- {ECO:0000256|SAAS:SAAS00055489};; Flags: Precursor;; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 85.0
  • Coverage: 701.0
  • Bit_score: 1227
  • Evalue 0.0
glycogen debranching protein glgx; K02438 glycogen operon protein GlgX [EC:3.2.1.-] similarity KEGG
DB: KEGG
  • Identity: 80.1
  • Coverage: 702.0
  • Bit_score: 1168
  • Evalue 0.0
Glycogen debranching enzyme GlgX n=1 Tax=Variovorax sp. CF313 RepID=J2JKS1_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 85.0
  • Coverage: 701.0
  • Bit_score: 1227
  • Evalue 0.0

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Taxonomy

Variovorax sp. CF313 → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2103
ATGCTGAGCCCAGGCAAGCCCTTCCCCCTGGGCGCAACGCCCATGCAACAAGGCGTCAACTTCGCACTGGCCGCACCCACAGCAGAAGCCGTAGACCTCTGCATCTTCGACACCACAGGCAAGAACGAGCAACAGCGCCTGAGGCTGCCGCAACAGACGGACGGCATCTGGCACGGCCATCTCCCCAGCGGCAAGCCGGGCCTCGTCTACGGCTACCGAGTCCACGGCCCCTGGTCCCCCAAAGAGGGAAAGCGCTTCAACCCCGCCAAGCTCCTGCTCGACCCCTACGCCCGCGAGATCGTCGGCACGTACGACGGCAGCGACATCTTCCTGGGTCACGACCCCGCGAACCCGGACAAGAGAGACACCCGAGACAACGCAGCCGCAGCCCTCAAGGCCCGGATAACAGCAGCAAACGAACGCCCATCAGCAGGCCACGCCCGCATACCAGCAACCGACCGCGTCCTCTACGAACTGCACGTCAAAGGCCAGACAAAGCTCCACCCAGCCATCCCCGCCCCCCTGCGAGGCAGCTATGCGGGATTGGCCGAACCCGCCATGCTCGACCACCTCCAGCGCCTGGGCGTGACCACCCTGAGCCTCATGCCCGTGCAGTACCGCGCCGACGAACAGCGCCTGCTGCGCATGGGCCTGAGCAACTACTGGGGCTACACGACCATCGGCTGGTTCGCGCCCGAGCCCCGCTACTGGAGCGGCCGCCCCGGCACCACGCCCGCCGGCGAGTTCCGGGCGATGGCCGACGCCATCCACGCGCGCGGCATGGAACTGGTGATCGACGTGGTCTACAACCACAGCGCCGAGACCGACGAGTTCGGCCCCACGCTCTCGCTGCGCGGCATCGACAACGCGCTGTACTACCGCCTGCGCCCGGACGACCGAGCGCTCTACGAGAACTGGGCCGGCACCGGCAACTGCCTCGACCTGACGGAGCCGCGCGTGCTGCGGCTCGTGATGGACAGCCTGCGCTTCTGGGCCTGCGAGATGGGCGTGGACGGCTTCCGCTTCGACCTGGCCCCGGTGCTCGGCCGCGATGCCGGCAGCAACGCCTTCGACCCGCGCGCGCCCTTCTTCGCGGCCATCGCGCAAGACCCGGTGCTGTCGCGCACGCTGCTTATCGCCGAGCCCTGGGACCTTGGCCCGGGCGGTTATCGCCTGGGCGAATTCCCGCCGGGCTGGCTCGAGTGGAACGACCGCTACCGCGACACCCAGCGCGGCTTCTGGCTGCGGCAGGACCAGGCGGACAAGGCCGGCCTCGGCGACTTCGCGCACCGCTTCACGGCGTCGAGCACGCAGTTCGCGCACGACGGCCGCGCGCCCACGGCCAGCGTCAACTTCGTCACCGCGCACGACGGCTTCACGCTGCGCGACCTGGTCAGCTACAACGAGCGCCACAACCTCGCCAACGGCGAAGACAACCGCGACGGCCACGGCCACAACATGAGCAACAACTGCGGCGTCGAGGGGCCGAGCGACGACCCCGCCGTGCTGGCGCGGCGCGAGCGGCTGCGGCGCGCGCTGTTGGCCACGCTGATGCTGTCCCAGGGCACGCCGATGCTGCTGGCCGGCGACGAGCTGGGCCACACCCAGCAAGGCAACAACAACGCCTACTGCCAGGACAACGAGACCACCTGGCTCGCCTGGATCGGTGCGGCGTCCGATCCCTCGAGCGACGCGGCCCGCATGAGCGCCTTCGTGGGGCGGCTGGCGGCGCTGCGGCGCGAAGCCCCGGCGCTGCGCAGCGCGCGCTGGTGGCCGGCCGAGCCGCCCGAGGGTACCCCGCCAGGCATCCGCTGGCTGCGCCCCAACGGCGAGCCGATGGCGCCCGCCGACTGGCAGACGGGCACGGCCCTTGCAATCCTCTTTGCCGGGAGCGATGCAACGGATGACGCAGGCGAAAGAAAGCAAGGCGCATGGCTGGTGATGGTGAACGCGGGGCCGGACACGGTGCAGTTCAGGCTGCCCGCAGGCGCCTGGCGCCTGTGCCTGTCGAGCGACCCCGGGCACGACCCGGGGAACGTGACCCGACCGCTGGACGGCACGGTGCCAGTGCCTTCCTCGAGCCTCGGGATTGCAAGAACGTAG
PROTEIN sequence
Length: 701
MLSPGKPFPLGATPMQQGVNFALAAPTAEAVDLCIFDTTGKNEQQRLRLPQQTDGIWHGHLPSGKPGLVYGYRVHGPWSPKEGKRFNPAKLLLDPYAREIVGTYDGSDIFLGHDPANPDKRDTRDNAAAALKARITAANERPSAGHARIPATDRVLYELHVKGQTKLHPAIPAPLRGSYAGLAEPAMLDHLQRLGVTTLSLMPVQYRADEQRLLRMGLSNYWGYTTIGWFAPEPRYWSGRPGTTPAGEFRAMADAIHARGMELVIDVVYNHSAETDEFGPTLSLRGIDNALYYRLRPDDRALYENWAGTGNCLDLTEPRVLRLVMDSLRFWACEMGVDGFRFDLAPVLGRDAGSNAFDPRAPFFAAIAQDPVLSRTLLIAEPWDLGPGGYRLGEFPPGWLEWNDRYRDTQRGFWLRQDQADKAGLGDFAHRFTASSTQFAHDGRAPTASVNFVTAHDGFTLRDLVSYNERHNLANGEDNRDGHGHNMSNNCGVEGPSDDPAVLARRERLRRALLATLMLSQGTPMLLAGDELGHTQQGNNNAYCQDNETTWLAWIGAASDPSSDAARMSAFVGRLAALRREAPALRSARWWPAEPPEGTPPGIRWLRPNGEPMAPADWQTGTALAILFAGSDATDDAGERKQGAWLVMVNAGPDTVQFRLPAGAWRLCLSSDPGHDPGNVTRPLDGTVPVPSSSLGIART*