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SCNpilot_cont_300_bf_scaffold_174_curated_26

Organism: scnpilot_dereplicated_Variovorax_1

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: comp(28873..30561)

Top 3 Functional Annotations

Value Algorithm Source
alpha amylase catalytic subunit; K01187 alpha-glucosidase [EC:3.2.1.20] similarity KEGG
DB: KEGG
  • Identity: 87.6
  • Coverage: 563.0
  • Bit_score: 1024
  • Evalue 0.0
Glycosidase n=1 Tax=Variovorax sp. CF313 RepID=J2JQR4_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 88.6
  • Coverage: 562.0
  • Bit_score: 1028
  • Evalue 0.0
Variovorax paradoxus strain MEDvA23 contig_54, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ27451.1}; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 87.8
  • Coverage: 567.0
  • Bit_score: 1032
  • Evalue 0.0

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Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1689
ATGGGCAGCAGCAACAATGGCAGCAGCAACAGCGAATGGTGGCGCGGCGCGGTGATCTACCAGATCTACCCGCGCAGCTTCAGCGACAGCAACGGCGACGGCATCGGCGACCTGCCCGGCATCACGGCCCGGCTCGAGCACGTGGCGGCGCTCGGCGTCGATGCGGTCTGGGTCTCGCCCTTCTTCCGCTCGCCGATGAAGGACTTCGGCTACGACGTGTCCGACTACCGCGCGGTCGATCCGCTGTTCGGCACGCTGGCCGACTTCGACGCCATGCTCGCGCGCATGCATGCGCTGGGCCTGAAGCTCATCATTGACCAGGTGCTCTCGCACACCTCCGACCGGCACGCCTGGTTCGCCGAAAGCCGCAGCTCGCGCGACAACCCCAAGGCCGACTGGTACGTGTGGGCCGACCCCAGGCCCGACGGCACGCCGCCCACCAACTGGCTGTCGGTGTTCGGCGGCTCGGCCTGGCAATGGGACTCGCGGCGGCGGCAGTACTACCTGCACAGCTTCCTCGCCGAGCAGCCCGACCTGAACTTCCATTGCGCCGAGGTGCAGGAAGCCTTGCTGGGCGAGGTGCGCTTCTGGTGCGAGCGCGGCGTCGACGGCTTCCGCTTCGACGCCTGCAACCACCAGTTCCACGACGCGCTGCTGCGCGACAACCCGCCGGCCTCGCTCGCGTCGATCGACGAAGTGAGCACGGTGCGCGCCGACAACCCGTATGCGATGCAGCAGCATCTTTACGACAAGAGCCAGCACGAGAACCTGGCTTTTCTCGAGAGCCTGCGCCGGCTGCTCGACGGCTACGGCGCGGTGGCGCTGGGCGAGGTCGGCGACGAGAACGCGCCGCCCGTCATGGCGCAATACACCGAGAGCGGCAAGCGCCTGCACCTGGCCTACAGCTTCAGCCTGCTCACGGCCGACCACAGCCCGGCGCACCTGCGCCACCAGGTCGAGGCGCTCGACGGCGCGCTGGCGCCCACCGGCGGCTGGGGCTGCTGGGCGGTGTCGAACCACGACGTGCCGCGCGTCGCCACGCGCTGGAGCAACGGCGCACCCGCCGACACGCGCCGCGACCGCCTCTGGCTGATGCTGCTGCTCACGCTGCGCGGCAGCGCCAGCATCTACCAGGGCGAGGAACTCGGCCTGCCCGAAGCCGAGGTGCCGTTCGAGCTGCTGCAGGACCCCTATGGCCGCGCGTTCTGGCCCGAGTTCAAGGGCCGCGACGGCTGCCGCACGCCGATGCCCTGGACCGCCGACGCCCCGCACGGCGGCTTCACCACCGGCACGCCCTGGCTGCCGGTGTACGGCCCGCACCTGCCGCTGGCCGTTGCGCGGCAAGCCGAAGACCCGGACTCGATGCTCGCCTTCAGCCGCGCCCTGCTGCGCTGGCGCCGCGCGCAGCCGCTGCTGCGCACCGGTGGCATCGCCTTCATCGACGCGCCCGAGCCCCTGCTGCATTTCGAGCGACGCGACGGGAACCAATCGCTGCACGCGGTCTTCAACCTGGGAAGCGCGCCGGTGTCGATGCCCTTGCCCGAACGATGGCGGTCATTGCAGCCTCTCGTCGGACAACCGCTCGCGCCGACTGCCGTCGTGCAGACAGTGAACGATGAGCGCATGCTGGTGCTGGCGCCTTACGGCGTCTTCATCGGCATGCTTGCCGACGAAGAAGGAACGAGCTGA
PROTEIN sequence
Length: 563
MGSSNNGSSNSEWWRGAVIYQIYPRSFSDSNGDGIGDLPGITARLEHVAALGVDAVWVSPFFRSPMKDFGYDVSDYRAVDPLFGTLADFDAMLARMHALGLKLIIDQVLSHTSDRHAWFAESRSSRDNPKADWYVWADPRPDGTPPTNWLSVFGGSAWQWDSRRRQYYLHSFLAEQPDLNFHCAEVQEALLGEVRFWCERGVDGFRFDACNHQFHDALLRDNPPASLASIDEVSTVRADNPYAMQQHLYDKSQHENLAFLESLRRLLDGYGAVALGEVGDENAPPVMAQYTESGKRLHLAYSFSLLTADHSPAHLRHQVEALDGALAPTGGWGCWAVSNHDVPRVATRWSNGAPADTRRDRLWLMLLLTLRGSASIYQGEELGLPEAEVPFELLQDPYGRAFWPEFKGRDGCRTPMPWTADAPHGGFTTGTPWLPVYGPHLPLAVARQAEDPDSMLAFSRALLRWRRAQPLLRTGGIAFIDAPEPLLHFERRDGNQSLHAVFNLGSAPVSMPLPERWRSLQPLVGQPLAPTAVVQTVNDERMLVLAPYGVFIGMLADEEGTS*