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SCNpilot_cont_300_bf_scaffold_174_curated_28

Organism: scnpilot_dereplicated_Variovorax_1

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: comp(31722..32696)

Top 3 Functional Annotations

Value Algorithm Source
ABC transporter substrate-binding protein n=1 Tax=Variovorax paradoxus RepID=UPI0003716BE7 similarity UNIREF
DB: UNIREF100
  • Identity: 94.8
  • Coverage: 324.0
  • Bit_score: 596
  • Evalue 1.70e-167
Uncharacterized protein {ECO:0000313|EMBL:EJL69884.1}; Flags: Precursor;; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 93.2
  • Coverage: 324.0
  • Bit_score: 590
  • Evalue 1.70e-165
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 86.8
  • Coverage: 325.0
  • Bit_score: 547
  • Evalue 2.80e-153

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Taxonomy

Variovorax sp. CF313 → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 975
ATGAAATTGCGCCTGAAACACCTCGCCCTGGCCCTCGCGGCCGCCGCCGGACTCGCCACCACGCCGCTGTGGGCACAGCACAACGACAAGCCCCTGCGCCTCGTCGTGCCCTTCGCCACCGGCGGCGCGCAGGACGTGATCGCCCGCTACCTGGGCGCCAAGCTCACCGACAAGCTGGGCCAGCCGGTCATCATCGACAACAAGGCCGGCGCCGGCGGCATCGTGGCCGCCGACGCGGTGGCCAAGGCGACCGACGGCGCCACGGTGCTGCTGGCCACGGGCGGCGCGGTCACCATCGCGCCCCATCTGCAGGCCAGGCTGCCCTACGACCCGGTGCACGAGCTGGTGCCGGTGGCGCTGGTGGCCGACACGCCCATGACGCTGTCGGTGCGCACCGAAAGCCCCTACAAGACCGTGGCCGATGTGCTCCGCGACGCCAAGGCCCGGCCCGGCCTGGTGACCTACGCCTCGACCGGCAACGGCACCGTTTCGCACCTGACCGGGGCGCTGCTGGCCCAGGCGAGCGGCGTGAACCTGCTGCATGTGCCCTACCGGGGCGCGGCGCCCGCCATGACCGACCTGCTGGGCGGACAGGTGGCGACCATCGTGACCAGCGTGGCCTCCATCGAGCCCATGGTCGCCAGCGGCAAGGCGCGCGTGCTGGGCACCTTCTCTCGCGTGTCCCTGCCCAGCATGGGCTCGGCGCCCACCATTGGCGAGGCCACCGGTCTGCCGGGCATGGAAGTGCCGGTCTGGGTCGGCGTGATGGCGCCGGCGCGGATGCCGGCGGCGGCCATCGAAAAGCTGTCGGCGGCGCTGGTGGAGGTGTGCAACCTGCCTGAGACAAAGCAGCGCTTCGCCCAGCTGGGCGCGGTCAACACCTGCGGCGGCCCAGCCGCATTGGGCAAGGTCGTCGCGGAAGACAGCCAGCGCTGGGCCAAGGTCATCAAGCAAGGCGGGATCAAGGTTGAATAA
PROTEIN sequence
Length: 325
MKLRLKHLALALAAAAGLATTPLWAQHNDKPLRLVVPFATGGAQDVIARYLGAKLTDKLGQPVIIDNKAGAGGIVAADAVAKATDGATVLLATGGAVTIAPHLQARLPYDPVHELVPVALVADTPMTLSVRTESPYKTVADVLRDAKARPGLVTYASTGNGTVSHLTGALLAQASGVNLLHVPYRGAAPAMTDLLGGQVATIVTSVASIEPMVASGKARVLGTFSRVSLPSMGSAPTIGEATGLPGMEVPVWVGVMAPARMPAAAIEKLSAALVEVCNLPETKQRFAQLGAVNTCGGPAALGKVVAEDSQRWAKVIKQGGIKVE*