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SCNpilot_cont_300_bf_scaffold_174_curated_30

Organism: scnpilot_dereplicated_Variovorax_1

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: 35491..36027

Top 3 Functional Annotations

Value Algorithm Source
Rare lipoprotein B n=1 Tax=Variovorax sp. CF313 RepID=J3CEJ6_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 86.0
  • Coverage: 178.0
  • Bit_score: 293
  • Evalue 1.30e-76
LPS-assembly lipoprotein LptE {ECO:0000256|HAMAP-Rule:MF_01186}; Flags: Precursor;; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 86.0
  • Coverage: 178.0
  • Bit_score: 293
  • Evalue 1.80e-76
lipopolysaccharide-assembly family protein similarity KEGG
DB: KEGG
  • Identity: 78.1
  • Coverage: 178.0
  • Bit_score: 267
  • Evalue 2.40e-69

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Taxonomy

Variovorax sp. CF313 → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 537
ATGAACAATCGCAATGTCTCGCTGCCGCGCCGCGGCCTTCTCCTCGGACTGGCGGTGGCCGGTGCCTCGCTGGGCCTGGCCGGGTGCGGCTTCGAGCTGCGCAAGGCGCCGGTCTTTGCGTTCAAGTCACTGTCGGTGGAAGGGTCCGAGGCCCTTCTCAAGTCGGCCATGATCAACCAGATCCGGCGCGAGCTGCGGGCGACCGGCTCCGTGACCGTGCTGCCGGCGGAAGACGCGTCCAAGGCCGACGTGATCCTCGAAATCCTGGGCGAAGACCGCAACCGCATCGTGATCTCGACCAATTCGGCGGGCCTGGTGCGCGAGCTTCAGCTGCAGCTGCGCATCCGCTTCCGGCTGCGTACGCCGGGCGGCAAGGACCTGCTGCCCGCCTCCGAGGTCTCGCAGACGCGCGACCTGAGCTTCAACGAAACCAACGCGCTCGCCAAGGAAGGCGAAGCCGACCTGCTGTTCCGCGACATGCAGTCGGACATCGCGCAGCAGTTGATGCGCCGTATCGCCGCGGTCAAGTCGCTGTAA
PROTEIN sequence
Length: 179
MNNRNVSLPRRGLLLGLAVAGASLGLAGCGFELRKAPVFAFKSLSVEGSEALLKSAMINQIRRELRATGSVTVLPAEDASKADVILEILGEDRNRIVISTNSAGLVRELQLQLRIRFRLRTPGGKDLLPASEVSQTRDLSFNETNALAKEGEADLLFRDMQSDIAQQLMRRIAAVKSL*