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SCNpilot_cont_300_bf_scaffold_174_curated_86

Organism: scnpilot_dereplicated_Variovorax_1

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: 93661..95112

Top 3 Functional Annotations

Value Algorithm Source
MFS transporter n=1 Tax=Variovorax paradoxus RepID=UPI000363A1E9 similarity UNIREF
DB: UNIREF100
  • Identity: 88.0
  • Coverage: 482.0
  • Bit_score: 840
  • Evalue 1.00e-240
Arabinose efflux permease family protein {ECO:0000313|EMBL:EJL78688.1}; Flags: Precursor;; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 89.4
  • Coverage: 479.0
  • Bit_score: 832
  • Evalue 3.80e-238
major facilitator superfamily protein similarity KEGG
DB: KEGG
  • Identity: 85.7
  • Coverage: 483.0
  • Bit_score: 820
  • Evalue 3.40e-235

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Taxonomy

Variovorax sp. CF313 → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1452
ATGTCTTCCTCTTCAGCCGCCTTGCGTCCTCCTCCGCCTACCGCCGGATGGGGCGAACTCTTCAGCGGCCGCAACGGCTGGCGCGCGCTCGCGCTGACCGGCGGTGTCGCGCTGCATGCCATCAATGTCCACATCGTGACCACCGTGCTGCCGTCGGTGGTGCGCGAGATCGGCGGCCTCGACTGGTACGCCTGGAGCACCACGCTTTTCGTGGTCGGCTCGATCCTGGGCGCCACGCTGTCGGTGCGGCTGCTGGCGGTGCTCGGCCCGCGCGGCGCATGCCTTGCGGCGCTGGCGGTGTTCAGCGCCGGCTCCATCGGCTGCGCGCTGGCGCCGGCCATGCCGTGGATGCTCGCGGGCCGCACGGTGCAGGGGCTCGGCGGCGGCTTGCTCGCGGCGCTGAGCTACGGGCTGATCCAGCTGGTGTTCGAGCAGCGGCTGTGGCCGCGCGCGGTGGCGCTGGTGTCGGGCATGTGGGGCGTCGCCACGCTGTGCGGGCCGGCCGTGGGCGGCCTCTTCGCGCAGGCCGGGCACTGGCGCTGGGCCTTCTGGTTCCTGCTGCCGGTGGCGGCCGCGCAGGCCGTGCTGGTGCTGGTGCAGCTGCGGCCCTCGGCCGGCGTGACGCACACGCGGCCCGCCACCATGCCGCGCGTGCCGGGTCCGCAGATCGGGCTGCTCGCCGCCTCGGTGCTGGTGATCGCGGCCAGCGGGTTGCTGTCCGACCTGCTCTGGCAGGCCGTCGGCGTGCTGTTGGGTCTGGCCATCGGCTTTGCCGCCACACGCATCGACCGCGATGCCGTGGTGCGCGTGCTGCCGACTGGCGCGTATTCGATGCGCGCGCCGCTCGGCGCCATTTACGCCAGCGTGGCGCTGCTGCTGATCGGCACCACCACCGAAATCTTCGTGCCGTATTTCCTGCAACTGCTGCACGGCCACTCGCCGCTCGCGGCGGGCTACCTCACGGCGGCGATGGCCGGCGGGTGGAGCGCGGGCTCGCTGCTGTCCTCGGGCCGCAGCGGCGCCGGGGCCGACCGCATGCTGCGCGCAGGACCGGTGATCTGCACGCTGGGGCTGATGGCGCTGGCGTGGCTGCTGCCGTCGCCGGGCGTGTTCGGCGCGGGCCTGGAGACCCTGGTCGTCGCGGTTGCGCTGGCGGCCGTGGGCCTCGGCGTGGGCATCGGCTGGCCGCACCTGCTGACGCGCGTGATGTCGCTGGCGCCCAAGGGCGAGGAAGGCCTGGCCTCGGCCTCGATCACCACGGTGCAGCTCTACGGCATGGCCGTGGGCGCTGCGGTGGCGGGGCTTGTGGCGAATGCGGCGGGGCTCACCACGCCGGGCGGCGTGGAGGGCGCGCGCTCGGCGTCGGTCTGGCTGTTCGCGAGCTTCGCGCTCGCACCGGCGCTGGCCGTGTGGCTGGCCTACCGGGCCGTGGCTGCCAGGCGCGGCTGGTGA
PROTEIN sequence
Length: 484
MSSSSAALRPPPPTAGWGELFSGRNGWRALALTGGVALHAINVHIVTTVLPSVVREIGGLDWYAWSTTLFVVGSILGATLSVRLLAVLGPRGACLAALAVFSAGSIGCALAPAMPWMLAGRTVQGLGGGLLAALSYGLIQLVFEQRLWPRAVALVSGMWGVATLCGPAVGGLFAQAGHWRWAFWFLLPVAAAQAVLVLVQLRPSAGVTHTRPATMPRVPGPQIGLLAASVLVIAASGLLSDLLWQAVGVLLGLAIGFAATRIDRDAVVRVLPTGAYSMRAPLGAIYASVALLLIGTTTEIFVPYFLQLLHGHSPLAAGYLTAAMAGGWSAGSLLSSGRSGAGADRMLRAGPVICTLGLMALAWLLPSPGVFGAGLETLVVAVALAAVGLGVGIGWPHLLTRVMSLAPKGEEGLASASITTVQLYGMAVGAAVAGLVANAAGLTTPGGVEGARSASVWLFASFALAPALAVWLAYRAVAARRGW*