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SCNpilot_cont_300_bf_scaffold_118_curated_1

Organism: scnpilot_dereplicated_Variovorax_1

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: 1..96

Top 3 Functional Annotations

Value Algorithm Source
Elongation factor Tu n=1 Tax=Variovorax paradoxus B4 RepID=T1XHY7_VARPD similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 31.0
  • Bit_score: 63
  • Evalue 3.90e-08
elongation factor Tu; K02358 elongation factor Tu similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 31.0
  • Bit_score: 63
  • Evalue 1.20e-08
Elongation factor Tu {ECO:0000256|HAMAP-Rule:MF_00118, ECO:0000256|RuleBase:RU004061}; Short=EF-Tu {ECO:0000256|HAMAP-Rule:MF_00118};; TaxID=1246301 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus B4.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 31.0
  • Bit_score: 63
  • Evalue 5.50e-08

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Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 96
AACCCGATCGCGATGGAAGAAGGCCTGCGCTTCGCCATCCGTGAAGGCGGTCGCACCGTGGGTTCGGGCGTCGTGGCCAAGATCCTCGACATCTAA
PROTEIN sequence
Length: 32
NPIAMEEGLRFAIREGGRTVGSGVVAKILDI*