ggKbase home page

SCNpilot_cont_300_bf_scaffold_118_curated_18

Organism: scnpilot_dereplicated_Variovorax_1

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: 10024..10470

Top 3 Functional Annotations

Value Algorithm Source
Cytochrome c class II n=1 Tax=Variovorax paradoxus (strain EPS) RepID=E6VBD3_VARPE similarity UNIREF
DB: UNIREF100
  • Identity: 94.6
  • Coverage: 148.0
  • Bit_score: 276
  • Evalue 1.40e-71
Variovorax paradoxus strain MEDvA23 contig_22, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ33393.1}; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 94.6
  • Coverage: 148.0
  • Bit_score: 277
  • Evalue 1.10e-71
cytochrome c class ii similarity KEGG
DB: KEGG
  • Identity: 94.6
  • Coverage: 148.0
  • Bit_score: 276
  • Evalue 4.30e-72

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 447
ATGACCCGATTCGCTTCGTTCGCCCTTGCAGCCGCCTGCGCTGCAATGTCCCTGCCGGCCGCGGCCCAGTTCGCCAAGCCCGAGGACGCCATCAAGTACCGCCAGAGCGCGCTGTTCGTGATGAGCCAGCACTTCGGCCGCCTGGGTGCCATGGCCAACGGCCGCGCGCCCTACGACGCCGCCGCTGCCGCCGCCAACGCCGAAGTGGTCGCCGACATGGCGAAGTTGCCCTGGGCCGCCTTCGGCCCAGGCACCGAGGGCGGCAAGGCCAAGCCCGAAGTGTGGAAGGAAGACGCCAAGTTCAAGGAACGGCAGCAGAAGCTGATCGACGAGACCGGCAAGCTGCTGGTCGCTGCCAAGGCCGGCAACATCGACGCACTGAAGGCCCAGTTCGGCCCGACCGCCGCGAGCTGCAAGGCCTGTCACGACAGCTTCCGCAACCAGTAA
PROTEIN sequence
Length: 149
MTRFASFALAAACAAMSLPAAAQFAKPEDAIKYRQSALFVMSQHFGRLGAMANGRAPYDAAAAAANAEVVADMAKLPWAAFGPGTEGGKAKPEVWKEDAKFKERQQKLIDETGKLLVAAKAGNIDALKAQFGPTAASCKACHDSFRNQ*