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SCNpilot_cont_300_bf_scaffold_118_curated_39

Organism: scnpilot_dereplicated_Variovorax_1

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: comp(26482..27852)

Top 3 Functional Annotations

Value Algorithm Source
Response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains n=1 Tax=Variovorax sp. CF313 RepID=J2KDH1_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 88.2
  • Coverage: 458.0
  • Bit_score: 779
  • Evalue 2.00e-222
Response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains {ECO:0000313|EMBL:EJL78265.1}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 88.2
  • Coverage: 458.0
  • Bit_score: 779
  • Evalue 2.80e-222
two component sigma-54 specific Fis family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 85.1
  • Coverage: 456.0
  • Bit_score: 761
  • Evalue 1.80e-217

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Taxonomy

Variovorax sp. CF313 → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1371
ATGGCGCATCTCCTGATCGTCGACGACGACGACGCCTTTCGCGACACGCTGGCCGAGACGCTGCAGGGCCTGGGCCACGAGACCGTCGCGGTCGCCAGCGGCGCGGAGGCCGTCGACACGGCTTCGCGCCAGCGCTTCGACGCCGTGTTCCTCGACCACCGCATGCCCGGCATGGACGGCCTGCAGACGCTCGCGGCCCTGCAGGCGCGCATGGCGCGGCTGCCGCCGGTGATCGTGCTCACGGCCTTCTCGAGCGCCGGCAACACCATCGAGGCGATGCGCCTGGGCGCCTTCGACCACCTGGCCAAGCCGATCAGCCGCGAGGCGGTGCGCGAGGTGCTGCAACGCGCGCTGCAGCAGCACACGGCGGCTTCGTCGGCGGCCACCGTCACGCAGGACGACGATGACGGCACCGACCTGATCGGCCCGAGCCAGGCCATGCGCGAGGTGCACAAGCGCATCGGGCTGGCCGCCGCCAACTCGATGCCGGTGCTGGTGCTCGGCGAAACGGGCACCGGCAAGGAAATGGTGGCGCGCGCCCTGCACCGTCATTCGGCGCGCGCCGGCCGGCCATTCGTGGCCGTCAACTGCTCGGCCATTCCGAAGGAGCTGCTCGAAAGCGAACTCTTCGGCCATGTGCGCGGCGCCTTCACCGGCGCCACCGGCGAGCGGCCCGGGTGCTTCCGCGCTGCGGACGGCGGCGTGCTGCTGCTCGACGAGATCGGCGACATGTCGCTGGACGTGCAGGCCAAGATCCTGCGCGCACTGCAGGAGGGCGAGGTCACGCCGCTGGGCAGCCACAGGACGGTGAAGGTCGACGTGCGCGTGGTCGCCGCCACCCACCGCGACCTGGCCGCCGCCGTGCGCGAAGGGCGCTTCCGGGAAGACCTGCTGTACCGGCTCGACGTGCTGTCGATCCGCATGCCGCCGCTGCGCGAACGGCTGGCGGACATCATTCCGCTGGCGGAGCACTTCCTGCGCCGCGCCGCGATGCAAGGCGCGCCCGATGCCGTGCCCAACAAGGCGCTGTCCGCCGAGGCGGCGCAGCGGCTGCTGAGCCACCCGTGGCCGGGCAACGTGCGGGAGCTGCGCAACGTGATGGAGCGCTGCCACGCGCTGGTGCGGCACCGCGTGATCGGCGGCGCGGACCTGGACCTCGCGCTCGGTGCCTCGCCAGCCGGCGAAGCGTCCGCCACCCTGCCCGCCGACTGGCTCGAGGGCGAACTGCCCGCCGCCGTCGAGCGGCTCGAGCGCCTGCTGATCGCCCACGCACTCGCCCAGACGCAGGGCAACCGCGCCGAAACCGCGCGGCGGCTGGGCATTCACCGCCAGCTGCTCTATCGCAAGCTGGCGCAGTACGGGCTCGACTGA
PROTEIN sequence
Length: 457
MAHLLIVDDDDAFRDTLAETLQGLGHETVAVASGAEAVDTASRQRFDAVFLDHRMPGMDGLQTLAALQARMARLPPVIVLTAFSSAGNTIEAMRLGAFDHLAKPISREAVREVLQRALQQHTAASSAATVTQDDDDGTDLIGPSQAMREVHKRIGLAAANSMPVLVLGETGTGKEMVARALHRHSARAGRPFVAVNCSAIPKELLESELFGHVRGAFTGATGERPGCFRAADGGVLLLDEIGDMSLDVQAKILRALQEGEVTPLGSHRTVKVDVRVVAATHRDLAAAVREGRFREDLLYRLDVLSIRMPPLRERLADIIPLAEHFLRRAAMQGAPDAVPNKALSAEAAQRLLSHPWPGNVRELRNVMERCHALVRHRVIGGADLDLALGASPAGEASATLPADWLEGELPAAVERLERLLIAHALAQTQGNRAETARRLGIHRQLLYRKLAQYGLD*