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SCNpilot_cont_300_bf_scaffold_118_curated_66

Organism: scnpilot_dereplicated_Variovorax_1

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: 52536..54191

Top 3 Functional Annotations

Value Algorithm Source
ATP dependent DNA ligase; K01971 DNA ligase (ATP) [EC:6.5.1.1] similarity KEGG
DB: KEGG
  • Identity: 92.2
  • Coverage: 551.0
  • Bit_score: 1027
  • Evalue 0.0
DNA ligase, ATP-dependent, PP_1105 family n=1 Tax=Variovorax sp. CF313 RepID=J2TID3_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 93.3
  • Coverage: 551.0
  • Bit_score: 1037
  • Evalue 0.0
DNA ligase, ATP-dependent, PP_1105 family {ECO:0000313|EMBL:EJL78297.1}; Flags: Precursor;; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 93.3
  • Coverage: 551.0
  • Bit_score: 1037
  • Evalue 0.0

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Taxonomy

Variovorax sp. CF313 → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1656
ATGAAAGCCTTCGCAGCGCTCTACCGCGAGCTCGACGCCAGCACATCGAACCTCGCCAAGCAGGCCGCGCTGCAACGCTACCTGCGCGAGGCGGACGCGGCCGATGCCGCATGGGCCGTCTACTTCCTGGCCGGCGGCAAGCCGCGCCAGCTCGTGCCCACCAAGTTGCTGCGCCTGCTCGCACAGGAGTCCGCGGGCCTGCCGGAGTGGTTGTTCGACGAAAGCTACGACGCCGTGGGCGACCTCGCCGAGACCATCGCGCTGCTGTTGCCGCCGCCCAGCGAAGTGCATGACCTCGGGCTCGCGGGCTGGGTCGAGCAGCACCTGCTTCCGCTGCGCGATGCCGCGAAAGCCTCGCCCGACCAACTGGCCGACCGCCTGCGCGCCCAGTGGCGGCAGCTCGCGGCCGAAGAGCGGCTGGTGTACTTCAAGCTCATCACCGGCGCGTTCCGCGTGGGCGTGTCGAAGCTGCAGGTCACGCAGGCGCTGGCGGCCGTCGGCGGCATCGACGCCAAGCGCGTCGCGCAGCGGCTCATGGGCTACACGCACATCGGCGCGCGGCCGCAGGCGGACGACTACCGCGCGCTCATCGCACCCGAGTCGGGCATGGAGCAGGTGCAGAAGACCAGCGGGCAGCCGTACCCCTTCTTCCTCGCGCATCCGTTCAACCTGCCGCTCGATCAGTTCGACGCCGTGCTCGGCCCGCCTTCGGACTGGATCGTGGAGTGGAAGTGGGACGGCATCCGCGCACAGCTGGTCAAGCGCGCGGGCGTGGCATGGGTCTGGTCGCGCGGCGAAGAACTGGTGACGGAGCGATTTCCCGAGCTCGCCGCACTCGGCGAAGCCCTGCCCGACGGCACCGTGCTCGACGGCGAGATCGCCGTGTGGCGCGACGGCAAGGTGCAGCCTTTTGCCGAGCTGCAGAAGCGCATCGGCCGCAAGACGCTCGGTGCCAAGTTGCTGCGCGACATCCCGGTCGTGCTGCTGGCCTACGACCTGCTCGAATGGGAAGGCCAGGATCTGCGCGCGCTGCCGCAGTCGCGGCGCCGCGTGCTGCTCGATGAACTGGTGGCTCGCATGCGGCACCCTTCGCTGCTGCCCAGCCCGATGCTCGAAGGCGCTGACTGGACCGACCTGGCCACGCAACGAGAGGCGGCACGCACCATGGGCGTGGAAGGCATGATGCTCAAGCGCCGCGACGCGCAATACGGCGTGGGCCGCACCAAGGATGTGGGCGTGTGGTGGAAGTGGAAGATCGATCCGCTAAGCATCGACGCCGTGCTCATCTACGCGCAGCGCGGCCACGGCCGCAGGGCGAGCCTGTTCAGCGACTACACCTTCGCGGTGTGGGACAGCCCGCCCGGGCAGGAAGACCGCAAGCTGGTGCCCTTCGCCAAGGCCTACTCGGGCCTCACCGATGCGGAGATGGCGCGCGTGGACGCGATCATCCGCAAGACCACGGTGGAGAGCTTCGGCCCGGTGAAGAGCGTGAAGCCGACGCTGGTGTTCGAGCTGGGCTTCGAGGGCATCGCGCGCAGCACGCGCCACAAGAGCGGCATCGCGGTGCGCTTTCCGCGCATGCTGCGGTGGCGGGAAGACAAGCCGGTGGAGGAGGCCGATACCTTGCAGACGCTTGCCGCGTTGCTGCCGGCATGA
PROTEIN sequence
Length: 552
MKAFAALYRELDASTSNLAKQAALQRYLREADAADAAWAVYFLAGGKPRQLVPTKLLRLLAQESAGLPEWLFDESYDAVGDLAETIALLLPPPSEVHDLGLAGWVEQHLLPLRDAAKASPDQLADRLRAQWRQLAAEERLVYFKLITGAFRVGVSKLQVTQALAAVGGIDAKRVAQRLMGYTHIGARPQADDYRALIAPESGMEQVQKTSGQPYPFFLAHPFNLPLDQFDAVLGPPSDWIVEWKWDGIRAQLVKRAGVAWVWSRGEELVTERFPELAALGEALPDGTVLDGEIAVWRDGKVQPFAELQKRIGRKTLGAKLLRDIPVVLLAYDLLEWEGQDLRALPQSRRRVLLDELVARMRHPSLLPSPMLEGADWTDLATQREAARTMGVEGMMLKRRDAQYGVGRTKDVGVWWKWKIDPLSIDAVLIYAQRGHGRRASLFSDYTFAVWDSPPGQEDRKLVPFAKAYSGLTDAEMARVDAIIRKTTVESFGPVKSVKPTLVFELGFEGIARSTRHKSGIAVRFPRMLRWREDKPVEEADTLQTLAALLPA*