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SCNpilot_cont_1000_p_scaffold_16651_curated_2

Organism: scnpilot_dereplicated_Verrucomicrobia_1

near complete RP 51 / 55 MC: 2 BSCG 48 / 51 MC: 4 ASCG 14 / 38
Location: comp(758..1003)

Top 3 Functional Annotations

Value Algorithm Source
FmdB family transcriptional regulator n=1 Tax=Verrucomicrobium spinosum RepID=UPI00017458E2 similarity UNIREF
DB: UNIREF100
  • Identity: 66.3
  • Coverage: 83.0
  • Bit_score: 121
  • Evalue 4.00e-25
FmdB family regulatory protein similarity KEGG
DB: KEGG
  • Identity: 64.0
  • Coverage: 86.0
  • Bit_score: 116
  • Evalue 5.30e-24
Regulatory protein FmdB family {ECO:0000313|EMBL:CDB55688.1}; TaxID=1263034 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Akkermansiaceae; Akkermansia; environmental samples.;" source="Akkermansia muciniphila CAG:154.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 64.0
  • Coverage: 86.0
  • Bit_score: 116
  • Evalue 2.40e-23

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Taxonomy

Akkermansia muciniphila CAG:154 → Akkermansia → Verrucomicrobiales → Verrucomicrobiae → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 246
ATGCCGATCTACGAATACGTGGCCGCTGAGGGCGGTTGTCCGGTTTGCCGCAAGGGCTTCGAGCTTCGTCGCCCGGTAACCCGTCCGGCCCTGACCCAGTGTCCCGTTTGCCGCGGCCCGGTAAAGAAGGTCATTTCCTCGGTCAATACCCCGGCGATTTCCAAGCCGCTGTCTGTCTCGGATGCCAAAAAGGCCGGTTTTGCCGTGTATGAAAAGCGGGACAAGGGCGTGTACGAAAAGCTCTAG
PROTEIN sequence
Length: 82
MPIYEYVAAEGGCPVCRKGFELRRPVTRPALTQCPVCRGPVKKVISSVNTPAISKPLSVSDAKKAGFAVYEKRDKGVYEKL*