ggKbase home page

SCNpilot_cont_1000_p_scaffold_2950_curated_13

Organism: scnpilot_dereplicated_Verrucomicrobia_1

near complete RP 51 / 55 MC: 2 BSCG 48 / 51 MC: 4 ASCG 14 / 38
Location: 21319..21675

Top 3 Functional Annotations

Value Algorithm Source
Helix-turn-helix, AraC domain protein n=1 Tax=Opitutaceae bacterium TAV5 RepID=H1J0S4_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 45.2
  • Coverage: 115.0
  • Bit_score: 105
  • Evalue 3.30e-20
DNA-binding domain-containing protein, AraC-type {ECO:0000313|EMBL:EIP98235.1}; TaxID=278956 species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae.;" source="Opitutaceae bacterium TAV1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 45.2
  • Coverage: 115.0
  • Bit_score: 105
  • Evalue 4.70e-20

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Opitutaceae bacterium TAV1 → Opitutales → Opitutae → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 357
ATGGATTTGCTCTCTCGCCACTGGCAAAGCCCGCTGTATCGCTGGTCCAGCCTTCGCACCGAACTGCTATGGATCTACGAGGGAACGATCGCCGCCGGATCGACCAGCGAGCGGCAGGATCACAGCCTCGGGTATTGGGTGTGGCTGCTCCGCCGGGGCTCGGTGCGCATGGAGATGGAGGGAAAGGTCTGGCAGGCCGATGCCGGCCAGTGGATGGTTTCTCCACAGGGAAAGACCCTGCAGGAATTCTCCCCCGACGCACGCATCCTCTCCGTTCACTTCCGATGCCAGTGGCCAACCGGAAAGAATCTTTTTTCGGGACGCGACGCTGTCGTCCTGAACTCCAGCCAGTTCCCC
PROTEIN sequence
Length: 119
MDLLSRHWQSPLYRWSSLRTELLWIYEGTIAAGSTSERQDHSLGYWVWLLRRGSVRMEMEGKVWQADAGQWMVSPQGKTLQEFSPDARILSVHFRCQWPTGKNLFSGRDAVVLNSSQFP