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SCNpilot_cont_1000_p_scaffold_6586_curated_5

Organism: scnpilot_dereplicated_Verrucomicrobia_1

near complete RP 51 / 55 MC: 2 BSCG 48 / 51 MC: 4 ASCG 14 / 38
Location: 5082..6599

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor SigA n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CWV6_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 66.5
  • Coverage: 511.0
  • Bit_score: 647
  • Evalue 1.30e-182
RpoD family RNA polymerase sigma-70 subunit; K03086 RNA polymerase primary sigma factor similarity KEGG
DB: KEGG
  • Identity: 58.3
  • Coverage: 527.0
  • Bit_score: 577
  • Evalue 4.00e-162
Tax=RIFCSPHIGHO2_12_FULL_Verrucumicrobia_41_10_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 70.3
  • Coverage: 502.0
  • Bit_score: 675
  • Evalue 6.30e-191

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Taxonomy

RHI_Verrucumicrobia_41_10 → Verrucomicrobiae → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 1518
GTGGTAAAGGGAGCAAAGGCTTCGGGCCCCACCAAACCTTCCGCCTCCTCCAAGAAGGCGGACAAACATGATGTCGCCCCGGCGGCCGAGGCGGCGACGCCTGCGGCGCAGGACGCGCAGAAAGCCCTGCAGGAGAAAGTTCGCGAGCTGATCAAGCTGGCGAAGGAGCAGGGCTATGTCACTTTTGATGACCTTGATGAGGCCCTCCCCGAGGGTATCAACGATCCGGACAGCATTGAGTCCGTCATCACCCAGCTCCGCGCCGTGGAGATCGAGATCATCGACTCCTCCGACGTCGATCGCGTCAAGGACGTCCGCAAGGACAGTGACGACGACGAGGAAAAGGACGAAAAGTCCGACAGCAAGCTCGATATCCTCGACGACCCCGTCCGCATGTACCTCAAGCAGATGGGCCAGGTGCCGCTGCTCACCCGCGAGCAGGAGGTGGAAATCTCCAAGCGCATCGAGGAAGCCGAGCTCAAGGTGCAGGAAATTCTCTATCAGTTCGGATTCATCTCCCGCGCCCACCTCGATCTGGCCCAAAAGCTCATCGACATGCGCGAGCGCTTCGACCGTGTCATCCTCGACAAAAAGATCGAGAGCCGCGAGCGCTACATGAAGACGCTTCCGCGCCTCTGTCAGCAGGTCAAGAAGCAGACCGATACCGTCGCCGATATCTACCGCGACGAGATCGGCGGCCACAAGGCCTCTCAGGATGCCCTTCGCAATTTCGAGAAGGCGCTTTCCGCTCTGCAGAAGCTCTATCCCAAGTTTTACTTCAAGCAGAAGGTGGTCGAGGACTTCGTCGGCCTCGCAGACGAAAACCTCCGCGCCTACAACAATCTCGTGCATGAGCACGAGAAGCACGTCAAGGACCCCGAGTCCAAGGTGCGCCGCCATCTCAGCCAGCAGCTCAAGGACATGCATCTCCGCAACTGGATGGCCGGGGAAGAGCTCATCACCAAGCACAAGGAGCTCAAGAGCTGGCACCGCAAGGCCCTGAAGGCGAAGACCGAGATGGTCGAGGCCAACCTGCGCCTCGTCATTTCCATCGCGAAGAAGTACACGAATCGCGGCCTTTCCTTCCTCGATCTCATCCAGGAGGGCAACATGGGCCTGATGAAGGCGGTCGAGAAATTCGAGTACCGCCGCGGCTACAAGTTCTCCACCTACGCGACATGGTGGATTCGCCAGGCCATCACCCGCTCGATCGCCGACCAGGCGCGCACCATCCGTATCCCGGTGCACATGATCGAGACGATCAACAAGCTCATCCGCGTGCAGAAGCAGCTCGTGCAGGAATACGGTCGCGAACCCGTGCCGGAGGAGATTTCCGAGGAAATCCAGCTCCCGGTCGAGCGTGTCCGAGCCGTGCTCAAGATGGCGCAGCAGCCCATCTCGCTTCAGNNNNNNNNNGGCGATTCCGACGACACCAGCTTCGGTGATTTCATCGAGGACAAGGGCGCTGAAAATCCCGCTGACCAGGCCGCCATCGTCCTGCTCAAGGACAAGATCAAG
PROTEIN sequence
Length: 506
VVKGAKASGPTKPSASSKKADKHDVAPAAEAATPAAQDAQKALQEKVRELIKLAKEQGYVTFDDLDEALPEGINDPDSIESVITQLRAVEIEIIDSSDVDRVKDVRKDSDDDEEKDEKSDSKLDILDDPVRMYLKQMGQVPLLTREQEVEISKRIEEAELKVQEILYQFGFISRAHLDLAQKLIDMRERFDRVILDKKIESRERYMKTLPRLCQQVKKQTDTVADIYRDEIGGHKASQDALRNFEKALSALQKLYPKFYFKQKVVEDFVGLADENLRAYNNLVHEHEKHVKDPESKVRRHLSQQLKDMHLRNWMAGEELITKHKELKSWHRKALKAKTEMVEANLRLVISIAKKYTNRGLSFLDLIQEGNMGLMKAVEKFEYRRGYKFSTYATWWIRQAITRSIADQARTIRIPVHMIETINKLIRVQKQLVQEYGREPVPEEISEEIQLPVERVRAVLKMAQQPISLQXXXGDSDDTSFGDFIEDKGAENPADQAAIVLLKDKIK