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SCNpilot_cont_1000_p_scaffold_7139_curated_2

Organism: scnpilot_dereplicated_Verrucomicrobia_1

near complete RP 51 / 55 MC: 2 BSCG 48 / 51 MC: 4 ASCG 14 / 38
Location: comp(284..1834)

Top 3 Functional Annotations

Value Algorithm Source
2-isopropylmalate synthase {ECO:0000256|HAMAP-Rule:MF_01025, ECO:0000256|SAAS:SAAS00049060}; EC=2.3.3.13 {ECO:0000256|HAMAP-Rule:MF_01025, ECO:0000256|SAAS:SAAS00085331};; Alpha-IPM synthase {ECO:0000256|HAMAP-Rule:MF_01025}; Alpha-isopropylmalate synthase {ECO:0000256|HAMAP-Rule:MF_01025}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 71.6
  • Coverage: 525.0
  • Bit_score: 722
  • Evalue 4.60e-205
leuA; Isopropylmalate synthase; K01649 2-isopropylmalate synthase [EC:2.3.3.13] similarity KEGG
DB: KEGG
  • Identity: 64.8
  • Coverage: 500.0
  • Bit_score: 667
  • Evalue 3.00e-189
2-isopropylmalate synthase n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XB18_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 71.6
  • Coverage: 525.0
  • Bit_score: 722
  • Evalue 3.30e-205

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Taxonomy

Pedosphaera parvula → Pedosphaera → Verrucomicrobiales → Verrucomicrobiae → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 1551
ATGTCAGACAAAGTTATCATCTTCGACACGACGTTGCGCGACGGCGAGCAGTGCCCCGGCGCCAGCATGAACCTGCGCGAGAAAATGGAGGTCGCCCGCCAACTGGAGCGCCTCAACGTGGACGTGATCGAAGCCGGTTTTCCCGTCATCAGCGACGGAGACTTCGAGGCGGTCGAGAAGATCGCCACGGAAATCAAAGGCCCGAAAATCTGCGGCCTGGCCCGATGCGTGGCCAAGGACATCGACGCGGCCGGCGCGGCGGTGAAGCCCGCGGGTGATCGCGGCCGCATCCACGTCTTCCTGGCGACCTCGGCGATTCATCGCGAGTTCAAGCTGAAGAAGGCGGAGGAGGAAATCATTCGTCTCGCCGTCGAGGGCGTCACCCGCGCCCGTGGGTTGGTCAAGGACGTCGAGTTCTCACCCGAGGATGCCTCCCGTACGGAGCCGGAATTTCTGGCCCGCGTGGTGCAGTCGGTCATCGAGGCCGGGGCGACGACAGTAAACATCCCGGATACCGTCGGCTTCGCAGTACCGGATCAGTATGCCGAGTTGATCGGTTATCTGCGTTCCAATGTGCGCAACATCGACGATGCCATCATCAGCGTGCATTGCCATGACGACCTGGGATTGGCCGTGGCCAACTCCCTGGCAGCGGTGAAGGCCGGAGCGCGTCAGGTGGAAGGCACTTTCAACGGCATCGGCGAGCGCGCGGGCAACTGCGCGTTGGAAGAAGTCGTGATGGCGGTCAAGACGCGCGGAGATTTCTACAGTGACTTGCATACGGATGTCGTCACGCGCGAGATCCTCAAAACCTCGCGCATCATCAGCCGCATGAGCGGCCTGCATGTTGCACGCAGCAAGGCCATCGTCGGTGAAAACGCCTTCGCCCACAGTTCCGGCATTCACCAGGATGGCATCCTGAAAAAGCGCGAGACCTACGAGATCATGGACCCCGAGGAGGTCGGCTGGGGCGGCACGGAGCTGCCCCTGACCAAGCACAGCGGCAGCCACGCCATGAAGGTGCGCCTGGAGCACCTGGGCTTTCACCTGAGCGATGCGCAGGTGAAGGTGGTCTACGACCGTTTCAAGGACGTCGGCGACAAGAAGAAGTTTGTCTACGACGACGACCTGGCCGCGCTGGTGGAGGATTCCATGACCTCGGACAGCGAGACGTACACGCTCGACTATATCCACGTCACCAGCGGCAGCACGACGGTGCCGACCGCGACTGTGCGCCTGAAAAAGGGCGGCGAGACTTTGCAGGATTCCAGCCCGGGCAATGGAGCTGTCGACGCCGCGATGCAGGCCATCGACCGCATCGTGAAGCGCCACGGACATCTCGCGCAGTACAGCGTCGAGGCGGTGACCCAGGGACGGGATTCCTTGGGCGAGGTGACGCTGAAGGTGGATTTTGGCAATGGCGACCTGATCACTGGCAAGGGAGCGAGCACCGATGTCATCGAGGCTAGCGCCCGCGCTTACGTGAACGCCGTCAACCGCGCTGAGATGCTCCAGGGCCGCAAAGCCGCCGTCGCCGCCGCTCCGATTTAA
PROTEIN sequence
Length: 517
MSDKVIIFDTTLRDGEQCPGASMNLREKMEVARQLERLNVDVIEAGFPVISDGDFEAVEKIATEIKGPKICGLARCVAKDIDAAGAAVKPAGDRGRIHVFLATSAIHREFKLKKAEEEIIRLAVEGVTRARGLVKDVEFSPEDASRTEPEFLARVVQSVIEAGATTVNIPDTVGFAVPDQYAELIGYLRSNVRNIDDAIISVHCHDDLGLAVANSLAAVKAGARQVEGTFNGIGERAGNCALEEVVMAVKTRGDFYSDLHTDVVTREILKTSRIISRMSGLHVARSKAIVGENAFAHSSGIHQDGILKKRETYEIMDPEEVGWGGTELPLTKHSGSHAMKVRLEHLGFHLSDAQVKVVYDRFKDVGDKKKFVYDDDLAALVEDSMTSDSETYTLDYIHVTSGSTTVPTATVRLKKGGETLQDSSPGNGAVDAAMQAIDRIVKRHGHLAQYSVEAVTQGRDSLGEVTLKVDFGNGDLITGKGASTDVIEASARAYVNAVNRAEMLQGRKAAVAAAPI*