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SCNpilot_cont_1000_p_scaffold_6515_curated_2

Organism: scnpilot_dereplicated_Verrucomicrobia_1

near complete RP 51 / 55 MC: 2 BSCG 48 / 51 MC: 4 ASCG 14 / 38
Location: 338..2842

Top 3 Functional Annotations

Value Algorithm Source
type II/III secretion system protein n=1 Tax=Verrucomicrobium spinosum RepID=UPI0001746044 similarity UNIREF
DB: UNIREF100
  • Identity: 45.4
  • Coverage: 800.0
  • Bit_score: 647
  • Evalue 2.20e-182
Type II and III secretion system protein {ECO:0000313|EMBL:EDY17868.1}; Flags: Precursor;; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 54.5
  • Coverage: 547.0
  • Bit_score: 540
  • Evalue 4.00e-150
type II and III secretion system protein; K02453 general secretion pathway protein D similarity KEGG
DB: KEGG
  • Identity: 30.7
  • Coverage: 850.0
  • Bit_score: 396
  • Evalue 2.70e-107

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Taxonomy

Chthoniobacter flavus → Chthoniobacter → Spartobacteria → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 2505
ATGAAGTTGCAAATCCTAACCGCCGTCGCAGCCGCTTCGCTTGCCCTCAGTACCGCCACCTCGCCAGCTCAAACCGGCGTCCAAGGGCTCGCGGAACGTGAAATCCGACGCCAGGAGCAGCTAAAGAACTACGCTGAAGAAGCCATCGCCAAAGGACAGCAGGCGATGAAAAATCAGGACTACGAATCCGCCTTCGCCTACTACAAGAGCGCGGTCGACGTCCTTCCCTCGGGCGGCCAGGCAGCCGGATCGATCCGCACCACGGCACTCGATGGATTCAGCCAGGCCGCAGTCAAGCTGGCTGAGCAGCGCATCTCGGAAGGCCGTTTTCAGGACGCGAACACCACGGTCGCGGTCGTACTCGAGGATCGTTACAATCCCAATTACGCCCCCGCTCTCGCCCTGCAGGCAAAGCTGAAGGATCCGACAAACTACAACAAGACGCTCACCCCGTCCTTCATCGCGAATGTTGAAGAGGTGAAGCAACTTCTTACCGAGGCCAAGGGTTTTTATGACTCCGGGCGCTTTGACCTGGCCCAGAAACGCTACGAGCAGGTTCTGAATATCGACCGCTACAACATCGCCGCCCGCCGCGGCATGGAGCAGGTCGACAACGCCCGCGCCAACTACGCCAATGTCGCCTACGGCGAAGCCCGCGGCGACATGCTCCGTGAAGTCAAGAAGGGCTGGGAATTGCCCATCCGCAAGTTTGACGTCAAGGGCTCCAGCATCATTGATCAGCCCCAGATCGATACCCGCGGCACCTCGGCGATCAACCGCAAGCTCGACGAGATCATCATTCCCAAGGTCGATTTTAGCGATGCCACCATTCGCGAAGCTCTCGACTTTCTCAAGCAACGCGCAGTCGCGCTCGACACCGGCGAGCAAGATCCCTCTCACCGCGGCGTCAACATCGTGCTCAAGCTCGCCCCGGATGCTCCCGAGGCTCAGCAGCGCATCTCTCTTTCCCTTACCGATATCCCGTTGCGCGTCGCCATCGACTACGTCGCCAAGGCGGCCAACCTGAAGCTCAAGATCGAGCCCTACGCTGTCGTCGTCGTTCCTCAATCTGAGCCTACCGACATCCTGATCACCAAGGAGTACAAAGTTCCCCCGAGCTTCATCACGGCGCTCCCGGCCAGTACGGATACCGCCTCCGCAGGCGGAGGCGGCAACGGTTCGATCTCTGTAGCTCCAGGCTCTCAATCCGCTGTCGCAGCCCGCTCGACTGCGCGCCAGTTCCTTGAGGCCAATGGCGTCACGTTCCCTCCCAATGCGAGCGCAAACTTCCTGACCGCTTCCAGCAAGCTGATCGTCCGCAACACTCAGGCAAATCTCGACATCATCGACTCATTGGTCGAGGTGCAGCTCCAGACTCCGCCAAGTCAGGTTGAGATTGAATCGAAGTTCCTCGAAGTAACCCAGAACAACCTTAACGAGCTCGGCTTTGACTGGCTCCTCGGCCAGTTTGCCCTGCCGGGTGGAACGGGTGTGTATGGTGGAGGCGGCACAGAAGGTTTTGGCCGGTCCATTAACAGCTCGCAGTATCCGTTTATCAATCCGGGCACAAGCCTCCCTGTTGGGGCGTCTAGTTCGACCTCCGGACCTGTTACGTCTGGCAATCGCACAGGAAGTTCAGCCATTAGCGTTAATGCGGTTGACGCGCTTCTCTTCGGAAGTCCGGTTGGCCCTGCCGCCGGAGCTCTAACACTCGCTGGGATATTCACTAACCCTCAATTTCAGGTCGTTATTCGTGCACTCAGTCAAAACAAAGGTGTAGATCTCGTAAGCGCACCAAAAGTGACTACAAAAAGTGGGCAACGGGCAACCATTCAGATCGTTCGAGAGTTCCGATATCCTACAGAGTATGATCTTCCTCAGGTCTCTGCTTCATCTGGCAGCACGTATCAACCAGTCGTCCCGACAACACCTACCGCGTTCGATACAAAACCAGTTGGTATTACGCTAGAAGTAGAACCGACAGTTGGCCCAGATGGTTTCACTATTGATCTCACTTTGTCCCCACGTGTCGTCGAATTTGATGGATTCATCAATTATGGCAGCCCGATTTCCGCGAGTGTCGCGGGAATAACCGGAGGAACCGGAAGCATTATAAATCTTGCGCCAACGTTTACCTTCGTTGCAACCGAGAACGTCATCAATCAACCGGTCTTTTCGACCCGTGAAGTAACCACCGATGTCACGGTATTTGACGGTGCAACGGTCGTACTCGGTGGACTCATTCGAGAGGATGTTCAAAAAGTCGAAGATAAGACTCCCATTCTCGGCGACATCCCGTTGGCCGGGCGTCTTTTCCGCACCACGGCGGATCAGCACATCAAGCGCAACCTGATCATGTTCGTCACAGCAAATCTTCTCGATCCAGCCGGTCAGCCTTTGATCAAGGTCGACGAGGAAGACGAAATTACCGCTCAGCCCAATGCTCAGGCCATGAGTTCCGAGGCTGTGTCGGACGATCCCACCACCATTCCAACCCCAGAGTAG
PROTEIN sequence
Length: 835
MKLQILTAVAAASLALSTATSPAQTGVQGLAEREIRRQEQLKNYAEEAIAKGQQAMKNQDYESAFAYYKSAVDVLPSGGQAAGSIRTTALDGFSQAAVKLAEQRISEGRFQDANTTVAVVLEDRYNPNYAPALALQAKLKDPTNYNKTLTPSFIANVEEVKQLLTEAKGFYDSGRFDLAQKRYEQVLNIDRYNIAARRGMEQVDNARANYANVAYGEARGDMLREVKKGWELPIRKFDVKGSSIIDQPQIDTRGTSAINRKLDEIIIPKVDFSDATIREALDFLKQRAVALDTGEQDPSHRGVNIVLKLAPDAPEAQQRISLSLTDIPLRVAIDYVAKAANLKLKIEPYAVVVVPQSEPTDILITKEYKVPPSFITALPASTDTASAGGGGNGSISVAPGSQSAVAARSTARQFLEANGVTFPPNASANFLTASSKLIVRNTQANLDIIDSLVEVQLQTPPSQVEIESKFLEVTQNNLNELGFDWLLGQFALPGGTGVYGGGGTEGFGRSINSSQYPFINPGTSLPVGASSSTSGPVTSGNRTGSSAISVNAVDALLFGSPVGPAAGALTLAGIFTNPQFQVVIRALSQNKGVDLVSAPKVTTKSGQRATIQIVREFRYPTEYDLPQVSASSGSTYQPVVPTTPTAFDTKPVGITLEVEPTVGPDGFTIDLTLSPRVVEFDGFINYGSPISASVAGITGGTGSIINLAPTFTFVATENVINQPVFSTREVTTDVTVFDGATVVLGGLIREDVQKVEDKTPILGDIPLAGRLFRTTADQHIKRNLIMFVTANLLDPAGQPLIKVDEEDEITAQPNAQAMSSEAVSDDPTTIPTPE*