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SCNpilot_cont_1000_p_scaffold_6515_curated_5

Organism: scnpilot_dereplicated_Verrucomicrobia_1

near complete RP 51 / 55 MC: 2 BSCG 48 / 51 MC: 4 ASCG 14 / 38
Location: 6097..6717

Top 3 Functional Annotations

Value Algorithm Source
transcription termination factor Rho n=1 Tax=Verrucomicrobium spinosum RepID=UPI0001746046 similarity UNIREF
DB: UNIREF100
  • Identity: 37.9
  • Coverage: 206.0
  • Bit_score: 151
  • Evalue 9.20e-34
rho; transcription termination factor Rho; K03628 transcription termination factor Rho similarity KEGG
DB: KEGG
  • Identity: 34.3
  • Coverage: 198.0
  • Bit_score: 113
  • Evalue 6.70e-23
Tax=BJP_IG2158_Rhodobacterales_64_37 similarity UNIPROT
DB: UniProtKB
  • Identity: 33.8
  • Coverage: 204.0
  • Bit_score: 115
  • Evalue 7.90e-23

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Taxonomy

BJP_IG2158_Rhodobacterales_64_37 → Rhodobacterales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 621
ATGCCCGCCACGGTTGAAGAATCCACGCCTCCCGCCGCACAAGCCAAGGTCCGTCTCAACGACCTGCAGGCGATGTCCCATACCACGTTGCTCGACCAGGCGGTTGAGCTCGGCCTGAAGCTTCGCCCGGAGGCCACGAAGCGCCATCTCGTTCTCGATCACGCCAAGCATTACATCACCTCGGGAATCCCGGTCGAAGCCACCGGGTTGCTCGAGGTAAATGGCGACCAGGGCGTGCTGCGCTGGCCCGCCTTTGGCCTGCGACCCGGGCCCGATGATGTTTTCGTTCCGCCTCAGATGCTCCGGCAGTACAAGCTGGAGGCCGGGCTGATGCTTCGCTGCACCCTCCGCCTGCCTCGCGACCGCGAACGCGGCCTGGTCATCGATACTCTCCTCTTCATCGAGGACGTCCCGCTGGCCGAGTGGCAGCCGCCGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGCGTCTTTCTCGAGAGCAACATCAATCCCTCGATCAGCGCCCGCGCGGTCGATATCGTCGCCCCGCTCGGCATGGGCCAGCGCGGCCTCATCGTCGCTCCGCCCCGCGCTGGAAAGACAATGATGCTCAAGGATATCGCCCGAGCC
PROTEIN sequence
Length: 207
MPATVEESTPPAAQAKVRLNDLQAMSHTTLLDQAVELGLKLRPEATKRHLVLDHAKHYITSGIPVEATGLLEVNGDQGVLRWPAFGLRPGPDDVFVPPQMLRQYKLEAGLMLRCTLRLPRDRERGLVIDTLLFIEDVPLAEWQPPXXXXXXXXXXXXXXVFLESNINPSISARAVDIVAPLGMGQRGLIVAPPRAGKTMMLKDIARA