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SCNpilot_cont_1000_p_scaffold_22605_curated_4

Organism: scnpilot_dereplicated_Verrucomicrobia_1

near complete RP 51 / 55 MC: 2 BSCG 48 / 51 MC: 4 ASCG 14 / 38
Location: 2108..2500

Top 3 Functional Annotations

Value Algorithm Source
Phosphomethylpyrimidine synthase {ECO:0000256|HAMAP-Rule:MF_00089, ECO:0000256|SAAS:SAAS00007814}; EC=4.1.99.17 {ECO:0000256|HAMAP-Rule:MF_00089, ECO:0000256|SAAS:SAAS00007809};; Hydroxymethylpyrimidine phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00089}; Thiamine biosynthesis protein ThiC {ECO:0000256|HAMAP-Rule:MF_00089}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 67.8
  • Coverage: 115.0
  • Bit_score: 164
  • Evalue 9.30e-38
phosphomethylpyrimidine synthase n=1 Tax=Verrucomicrobium spinosum RepID=UPI00017455F9 similarity UNIREF
DB: UNIREF100
  • Identity: 69.6
  • Coverage: 115.0
  • Bit_score: 166
  • Evalue 1.80e-38
thiamine biosynthesis protein ThiC; K03147 thiamine biosynthesis protein ThiC similarity KEGG
DB: KEGG
  • Identity: 59.3
  • Coverage: 108.0
  • Bit_score: 130
  • Evalue 3.30e-28

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Taxonomy

Chthoniobacter flavus → Chthoniobacter → Spartobacteria → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 393
ATGATCGCATCGAAAGCCGACCTGGAGCCGCAAAGCGCTGATCCCCTCCCCAATTCCACCCGCGTTTACGCCGAGGGAACGCTGCATCCGGACGTTCGCGTGCCCATGCGCGAGATCGCCCTCAGCCCGACCAAGGGCCTCGACGGCTCGATCGAGGTCAATGAACCCGTCCGCGTCTATGACACGAGCGGCCCGTGGGGCGACCCCGCCTTTGACGGCGACGTGGAAAAGGGCCTGCCGGCGCTCCGCCGCGACTGGATTTTGAAGCGCGGCGATGTCGAGGAATACACTGGCCGCGTGGTCGTTCCTCAGGACAACGGCTATCTCAGCGACGAACATTCCCGCCTGCGCAATGGCGGTCTCGGCCTTCGCGCCCCGGAATCGGCCCAGCGC
PROTEIN sequence
Length: 131
MIASKADLEPQSADPLPNSTRVYAEGTLHPDVRVPMREIALSPTKGLDGSIEVNEPVRVYDTSGPWGDPAFDGDVEKGLPALRRDWILKRGDVEEYTGRVVVPQDNGYLSDEHSRLRNGGLGLRAPESAQR