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SCNpilot_cont_1000_p_scaffold_6508_curated_4

Organism: scnpilot_dereplicated_Verrucomicrobia_1

near complete RP 51 / 55 MC: 2 BSCG 48 / 51 MC: 4 ASCG 14 / 38
Location: 1441..2322

Top 3 Functional Annotations

Value Algorithm Source
LysR family transcriptional regulator n=1 Tax=Verrucomicrobium spinosum RepID=UPI0001744D79 similarity UNIREF
DB: UNIREF100
  • Identity: 54.3
  • Coverage: 291.0
  • Bit_score: 305
  • Evalue 5.40e-80
Transcriptional regulator, LysR family {ECO:0000313|EMBL:EFL49236.1}; TaxID=596151 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio fructosivorans JJ.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 53.1
  • Coverage: 294.0
  • Bit_score: 304
  • Evalue 2.20e-79
LysR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 53.3
  • Coverage: 289.0
  • Bit_score: 293
  • Evalue 6.70e-77

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Taxonomy

Desulfovibrio fructosivorans → Desulfovibrio → Desulfovibrionales → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 882
ATGGAATTGCGCCACCTGAGAATCTTTGCCGAGGTGGTGAAACAAGGCGGATTTTCCGCCGCCGCCAAGACCCTGGGCAGTACGCAATCCACAGTAAGCAAGGTCATCCAGCAACTGGAACATGATTGCGGAATGCCTCTGCTGGATCGTCTGCCCCATGGCATCAAGCCGACGGATACCGGCGAGGCCGTGCTGCAGCGCGCCCGCACCATGCTGGCCGAGCAGGAACGGCTGGAAAGCGATCTCGCCGCCCGGCGCGGCCTGGAGATCGGGTCCCTGCGCATCGGAGTGCCGCCGCTCGGCAGCGCGACGATTTTTGCCCCGCTGATTGCCAAGTACCGGAAATTGCACCCCGGCATCCGTATCGATTTGCTGGAAGAGGGCAGCAACCGGCTGGAAAGCGCGGTGCAGTCCGGCGAGATCGAGGTGGGCGGGACGCTGCTTCCCGCCCCCGAGTCCTTCGCGTGGCAGCCGGTGCGGGAGGAACCCATGATGGCGCTGCTTCCTGCCGGGCATCCGCTTTGGGGACGCAAAAGCATCGAGTTCTTCGAGCTGGATGGGAACCCGTGCATCCTCTTTGAGCGTGGATTTGCCCTGAATGCCATCATTGCCTCCGCCTGCCGGAAAAAAGGCATCGAGCTGCACGAGGTCGCGCGGAGTTCGCAGGCCGAGTTCATCATCGCGCTCGTCGCGGCGGGTTTGGGTATTGCCCTGCTCCCGCGCATCATCGCGACGTCGCATGGCGGCGTGAAAGCCGTGCTGATCGAGGATAGCGACCTTCTCTGGCGGCTGGGGCTGATCTGGCGGCAGGGCTCTCCCCTCTCCCGCCAGGCGCAGAACTGGGTGGACCTGGTACGCAAGCATTCGTCGCCTGCGCCGTAA
PROTEIN sequence
Length: 294
MELRHLRIFAEVVKQGGFSAAAKTLGSTQSTVSKVIQQLEHDCGMPLLDRLPHGIKPTDTGEAVLQRARTMLAEQERLESDLAARRGLEIGSLRIGVPPLGSATIFAPLIAKYRKLHPGIRIDLLEEGSNRLESAVQSGEIEVGGTLLPAPESFAWQPVREEPMMALLPAGHPLWGRKSIEFFELDGNPCILFERGFALNAIIASACRKKGIELHEVARSSQAEFIIALVAAGLGIALLPRIIATSHGGVKAVLIEDSDLLWRLGLIWRQGSPLSRQAQNWVDLVRKHSSPAP*