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scnpilot_dereplicated_Verrucomicrobia_1

scnpilot-dereplicated_Bacteria_61_1
In projects: scnpilot-dereplicated  |  SCNPILOT_CONT_1000_P

Consensus taxonomy: Bacteria

Displaying items 351-400 of 407 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
SCNpilot_cont_1000_p_scaffold_9604_curated
Species: Chthoniobacter flavus (66.67%)
3 4854 bp 62.34 1.00 98.70
SCNpilot_cont_1000_p_scaffold_28402_curated
Species: Chthoniobacter flavus (66.67%)
3 2056 bp 60.46 1.00 99.81
SCNpilot_cont_1000_p_scaffold_27407_curated
Species: Chthoniobacter flavus (66.67%)
3 2161 bp 64.83 1.00 99.81
SCNpilot_cont_1000_p_scaffold_31149_curated 3 1880 bp 46.81 1.00 33.03
SCNpilot_cont_1000_p_scaffold_36048_curated
Species: Chthoniobacter flavus (66.67%)
3 1776 bp 60.08 1.00 79.39
SCNpilot_cont_1000_p_scaffold_12275_curated
Species: RHI_Verrucumicrobia_41_10 (66.67%)
3 3982 bp 59.42 1.00 94.25
SCNpilot_cont_1000_p_scaffold_31726_curated
Species: Opitutaceae bacterium TAV1 (66.67%)
3 1915 bp 62.72 1.00 80.21
SCNpilot_cont_1000_p_scaffold_8456_curated
Domain: Bacteria (66.67%)
3 5384 bp 60.77 1.00 94.22
SCNpilot_cont_1000_p_scaffold_12530_curated
Class: Opitutae (66.67%)
3 3912 bp 57.72 1.00 71.32
SCNpilot_cont_1000_p_scaffold_28408_curated 3 2108 bp 45.21 1.00 55.93
SCNpilot_cont_1000_p_scaffold_12584_curated
Phylum: Verrucomicrobia (66.67%)
3 3905 bp 61.56 1.00 93.11
SCNpilot_cont_1000_p_scaffold_20525_curated
Order: Opitutales (66.67%)
3 2682 bp 61.63 1.00 96.42
SCNpilot_cont_1000_p_scaffold_15655_curated
Phylum: Verrucomicrobia (66.67%)
3 3292 bp 63.09 1.00 97.24
SCNpilot_cont_1000_p_scaffold_15976_curated
Species: Chthoniobacter flavus (66.67%)
3 3243 bp 62.57 1.00 94.26
SCNpilot_cont_1000_p_scaffold_9201_curated
Domain: Bacteria (100%)
3 4961 bp 60.17 1.00 88.59
SCNpilot_cont_1000_p_scaffold_34165_curated
Phylum: Verrucomicrobia (66.67%)
3 1845 bp 63.25 1.00 95.61
SCNpilot_cont_1000_p_scaffold_72476_curated
Species: Chthoniobacter flavus (50%)
2 1732 bp 61.84 1.00 87.47
SCNpilot_cont_1000_p_scaffold_53452_curated
Species: RHI_Verrucumicrobia_41_10 (50%)
2 1329 bp 60.72 1.00 82.84
SCNpilot_cont_1000_p_scaffold_29946_curated
Species: Chthoniobacter flavus (50%)
2 1939 bp 58.33 1.00 88.81
SCNpilot_cont_1000_p_scaffold_48852_curated
Species: Opitutaceae bacterium TAV1 (50%)
2 1504 bp 60.57 1.00 86.97
SCNpilot_cont_1000_p_scaffold_41871_curated
Species: Pedosphaera parvula (50%)
2 1472 bp 49.80 1.00 85.39
SCNpilot_cont_1000_p_scaffold_52146_curated
Species: Opitutus terrae (50%)
2 1205 bp 65.39 1.00 98.34
SCNpilot_cont_1000_p_scaffold_27087_curated
Species: GWF2_Verrucomicrobia_62_7_curated (50%)
2 2180 bp 68.21 1.00 99.63
SCNpilot_cont_1000_p_scaffold_61760_curated
Species: Hyphomicrobium sp. MC1 (50%)
2 1197 bp 64.66 1.00 96.74
SCNpilot_cont_1000_p_scaffold_13409_curated
Species: Chthoniobacter flavus (100%)
2 3601 bp 59.98 1.00 99.81
SCNpilot_cont_1000_p_scaffold_70003_curated
Species: Chthoniobacter flavus (50%)
2 1091 bp 62.33 1.00 85.52
SCNpilot_cont_1000_p_scaffold_12710_curated
Species: Opitutaceae bacterium TAV5 (50%)
2 3821 bp 61.79 1.00 98.38
SCNpilot_cont_1000_p_scaffold_32934_curated
Species: Opitutaceae bacterium TAV5 (50%)
2 1844 bp 56.45 1.00 71.26
SCNpilot_cont_1000_p_scaffold_53608_curated
Species: Pedosphaera parvula (50%)
2 1212 bp 68.81 1.00 86.14
SCNpilot_cont_1000_p_scaffold_35323_curated
Species: Chthoniobacter flavus (50%)
2 1737 bp 64.31 1.00 89.29
SCNpilot_cont_1000_p_scaffold_52540_curated
Species: CG_Verruco_01 (50%)
2 1261 bp 70.58 1.00 97.54
SCNpilot_cont_1000_p_scaffold_23561_curated
Species: Chthoniobacter flavus (100%)
2 2416 bp 67.55 1.00 99.46
SCNpilot_cont_1000_p_scaffold_11190_curated
Species: Chthoniobacter flavus (100%)
2 4297 bp 61.11 1.00 100.05
SCNpilot_cont_1000_p_scaffold_76373_curated
Species: RHI_Verrucumicrobia_41_10 (100%)
2 1024 bp 60.06 1.00 100.20
SCNpilot_cont_1000_p_scaffold_48524_curated
Species: Opitutaceae bacterium TAV5 (50%)
2 1427 bp 63.28 1.00 95.87
SCNpilot_cont_1000_p_scaffold_32142_curated
Species: RHI_Verrucumicrobia_41_10 (100%)
2 1927 bp 62.90 1.00 85.47
SCNpilot_cont_1000_p_scaffold_32625_curated
Species: Verrucomicrobiae bacterium DG1235 (50%)
2 1907 bp 60.88 1.00 94.86
SCNpilot_cont_1000_p_scaffold_49257_curated
Species: Chthoniobacter flavus (50%)
2 1403 bp 63.36 1.00 99.86
SCNpilot_cont_1000_p_scaffold_62104_curated
Species: Chthoniobacter flavus (50%)
2 1116 bp 63.44 1.00 100.54
SCNpilot_cont_1000_p_scaffold_24081_curated
Species: Chthoniobacter flavus (100%)
1 2241 bp 61.27 1.00 99.87
SCNpilot_cont_1000_p_scaffold_76771_curated
Species: Chthoniobacter flavus (100%)
1 950 bp 73.58 1.00 99.79
SCNpilot_cont_1000_p_scaffold_53281_curated
Species: Opitutaceae bacterium TAV1 (100%)
1 1294 bp 60.28 1.00 99.69
SCNpilot_cont_1000_p_scaffold_33740_curated
Species: GWC2_Geobacteraceae_48_7_curated (100%)
1 1772 bp 52.14 1.00 42.33
SCNpilot_cont_1000_p_scaffold_43049_curated
Species: Chthoniobacter flavus (100%)
1 1406 bp 62.87 1.00 79.59
SCNpilot_cont_1000_p_scaffold_74294_curated
Species: Opitutus terrae (100%)
1 1045 bp 60.10 1.00 76.36
SCNpilot_cont_1000_p_scaffold_64064_curated
Species: Chthoniobacter flavus (100%)
1 969 bp 65.84 1.00 99.69
SCNpilot_cont_1000_p_scaffold_15517_curated
Species: Pedosphaera parvula (100%)
1 2989 bp 22.82 1.00 65.14
SCNpilot_cont_1000_p_scaffold_53702_curated
Species: Chthoniobacter flavus (100%)
1 1325 bp 76.08 1.00 99.85
SCNpilot_cont_1000_p_scaffold_69080_curated
Species: RLO_Verrucomicrobia_64_8 (100%)
1 981 bp 61.37 1.00 99.69
SCNpilot_cont_1000_p_scaffold_16652_curated
Species: Chthoniobacter flavus (100%)
1 3144 bp 60.78 1.00 99.90
Displaying items 351-400 of 407 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.