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scnpilot_p_inoc_scaffold_1898_curated_8

Organism: scnpilot_dereplicated_Xanthomonadales_3

near complete RP 52 / 55 BSCG 51 / 51 ASCG 13 / 38
Location: 5159..9319

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Short=RNAP subunit beta {ECO:0000256|HAMAP-Rule:MF_01321};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01321};; RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Transcriptase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 83.8
  • Coverage: 999.99
  • Bit_score: 2324
  • Evalue 0.0
DNA-directed RNA polymerase subunit beta (EC:2.7.7.6) similarity KEGG
DB: KEGG
  • Identity: 83.8
  • Coverage: 999.99
  • Bit_score: 2324
  • Evalue 0.0
DNA-directed RNA polymerase subunit beta n=1 Tax=Rudaea cellulosilytica RepID=UPI000370045F similarity UNIREF
DB: UNIREF100
  • Identity: 85.9
  • Coverage: 999.99
  • Bit_score: 2360
  • Evalue 0.0

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Taxonomy

Rhodanobacter denitrificans → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 4161
ATGACCTACTCGTTCACTGAAAAGAAGCGCATCCGCAAGGATTTCGGCAAGCGTCCGCCCGTGCTGGACGTTCCCTTCCTGCTGGCCATCCAGGTCGATTCGTATCGCGAGTTCCTGCAACTCGAAGGCGATCCGAACAAACGTGAGGACAAGGGTCTGCACGCGGCCTTGCAGTCGGTGTTTCCGATTTCCAGCTACGCCGGCCATGCCGCACTCGAGTACGTCAGCTATCGCCTCGGCGAGCCCGCGTTCGACGAGCGCGAATGCCGCTCGCGTGGCATGTCCTACGGTGCGCCGCTGCGCGTGACCGTGCGCCTGGTCATCTACGATCGCGAATCGTCGAACAAGGCGATCAAGTACGTCAAGGAACAGGAAGTCTACATGGGCGAATTGCCGCTCATGACCGATACTGGCACCTTCATCGTCAATGGCACCGAGCGCGTCATCGTTTCCCAGTTGCATCGTTCGCCGGGCGTGTTCTTCGATCATGACCGCGGCAAGACGCATTCTTCGGGCAAGCTGCTGTACTCAGCCCGCGTGATTCCCTATCGCGGCTCGTGGCTCGATTTCGAATTCGATCCGAAGGATGCCCTGTTCACGCGCATCGACCGTCGCCGCAAGTTGCCGGTGACGATCCTGCTGCGCGCGCTGGGTTATACCAACGAGCAGATGCTCGACATCTTCTTCGAGCACAACGTCTTTCACCTTGGCAAGAAGGATGGCGCCGAGCTTGAGCTTGTTTCCGAGCGCCTGCGCGGTGAAACGCTCAACTTCGACCTGCGCATCGGCAAGGATGTCATCGTCGAGGCCGGCAAGCGCATCACTGCCCGCCACGTGCGCCAGCTTGAAAGCGCCAAGATCAAGTCGCTGGAAGTGCCCGACGAATACCTGATCGGCCGCATCCTTGCCAACGACATCGTCGACACGAAGACCGGCGAACTGCTCGCTTCGGCCAACGACGAGATCGACCAGACGCATGTCGAGGCTTTCCGCAAGGCCGGCATTGGTCGCATCGCTACCCTGTGGGTCAACGATCTCGATCGTGGCCCGTACATCTCGCAGACCCTGCGCATCGATCCCTCGAAGACGCCGTTGGAGGCGCTGGTCGAGATCTATCGCATGATGCGTCCCGGCGAACCGCCGACCAAGGATGCCGCGCAGAACCTGTTCCAGAACCTGTTCTTCTCGGCCGAGCGCTACGATCTCGATCGCGTCGGTCGCATGAAGTTCAATCGCCGAGTCGGGCGCAAGGACGACAATGGTCCGGGCGTGCTGTACGACGGGCGCTATTTCCGTGATCGCAACGACGAAACCTCGAAGGCGATGGTCAAGGAGCTTGGCGCAGGTTCGGACATTCTCGACGTGCTCAAGGTACTCATCGACATCCGCAATGGTCGCGGCACGGTCGATGACATCGACCACCTCGGCAACCGTCGCGTCCGCTCTGTCGGCGAGATGGCCGAGAACGTGTTCCGCATCGGCCTTGTGCGCGTCGAGCGTGCGGTCAAGGAGCGCCTGTCGCTGGCCGAGTCGGAAGGCCTGACGCCGCAGGAACTGATCAACGCCAAGCCGGTGGCTGCCGCGATCAAGGAGTTCTTCGGCTCCTCGCAGCTTTCGCAGTTCATGGACCAGAACAATCCGCTTTCGGAAGTCACCCACAAGCGCCGCGTCTCCGCACTCGGCCCGGGTGGCCTGACCCGCGAGCGCGCCGGCTTCGAGGTGCGCGACGTGCACCCGACCCATTACGGCCGCGTCTGCACGATCGAAACGCCGGAAGGCCCGAACATCGGCCTGATCAACTCGCTCGCCGTCTATGCGCGCACGAACGGCTACGGCTTCCTCGAGACGCCGTACCGCAAGGTCGCCAAGGGCAAGATCACCAATGAGGTCGAATTCCTTTCGGCAATCGACGAAGGCGATCACGTCATTGCCCAGGCGAACTCGCCGCTGAGCAAGGATGGCGCCTTTACCGAGGAGTTCGTTTCCTGCCGCTCGCACGGTGAATCGGAATTGCGCCCGCCCAGCGACGTCGAATACATGGACGTCTCGCCGATGCAGACTGTTTCGGTTGCTGCCGCACTCGTGCCCTTCCTCGAGCATGATGACGCCAACCGCGCCCTCATGGGCGCGAACATGCAGCGCCAGGCCGTGCCGACCCTGCGTGCGCAGACCCCGGTTGTCGGTACCGGCATCGAGCGCGCCGTGGCGCGCGACTCGGGCGTGATCGTGGCAGCGCGTCGTGGCGGCGAGATCGACCAGGTCGATGCCGCGCGCATCGTCGTGCGTGTGCGCGAGGACCAGATTGGCGAGAACGACGCCGGTGTCGACATCTACCCGTTGACCAAGTACACCCGTTCAAACCAGAACACCAACCTCAACCAGCGTCCGCTGGTCAATGTCGGCGACAAGGTCGAGATTGGCGATGTGCTGGCGGACGGCCCGTCGACCGATCTCGGCGAACTGGCTCTTGGCCAGAACATGCTGGTCGCGTTCATGCCGTGGAACGGCTACAACTTCGAGGACTCGATCCTGATCTCGGAGCGCGTCGTCCAGGAGGACCGCTACACGACAATCCATATCGAGGAGCTGACCTGCGTCGCCCGCGACACCAAGCTCGGGCCGGAGGAAATCACCGCCGATATCCCGAACGTCGGCGAGCAGGCGTTGGCCCGACTCGACGAGTCCGGCGTGGTCTACATCGGTGCCGAAGTGAAGGCCGGCGACATCCTCGTCGGCAAGGTCACGCCGAAGGGCGAAAGCCAGCTCACCCCGGAAGAAAAGCTCCTGCGCGCGATCTTCGGCGAGAAGGCTTCCGATGTGAAGGACAGCTCGCTGCGCGTGCCGCCCGGCATGGACGGCACGGTCATCGACGTCACCGTGTTCACCCGCGATGGCATCGAGAAGGACAAGCGTGCGCGGCAGATCGAAGAGATGGAAATCAAGCGCATCAAGAAGGACTTCGACGATCAGTTCCGCATCCTTGAAGGCGCCATCTACAACCGCCTGCGCAGCAGCATCCTCGGCAAGACCGTCAATGGCGGCCCTGGTGGCATCAAGAAGGGCGCGACGCTGAATGATGAGTACCTCGACAGCCTCAAGCGCGACGAGTGGTTCTCGATCCGCATGAAGGACGAGGATGCCGCCGAGATGCTCGAGCGCGCCCAGGAACAGATCAAGGGCCACCGCGAGGAGTTCGACCGTCGCTTCAAGGAGAAGCAGGCGAAGATCACCGCCGGCGACGATCTCGCCCCCGGCGTGCTGAAGATGGTCAAGGTCTATCTGGCCGTCAAGCGCCGCATCCAGCCCGGCGACAAGATGGCCGGACGCCATGGCAACAAAGGTGTCGTCTCGATGATCGTTCCGGTCGAGGACATGCCCTACGCCGCCGATGGCCGCCCGGTCGATATCGTGCTCAACCCGCTCGGCGTGCCCTCGCGCATGAACATCGGCCAGATTCTCGAGACCCATCTCGGCTGGGCCGCGAAGGGCCTTGGCGAGAAGATCGGCAAGATGCTCGATGCCAACGAGAAGGTCGGCGAATTGCGCAAGTTCCTCGACGCGATCTACAACCACGACAAGGACAGTTTCAAGCAGCGCGTTGACCTCAAGTCCTTCAGTGATGACGAACTGCTGGCGATGGCGCGCAACCTGCGTACCGGCGTGCCGATGGCAACTCCGGTGTTCGATGGTGCGTTCGAGTCCGAGATCAAGGCCATGCTCAAGCTGGCCGGTCTGCCGGAATCAGGCCAGACCATTCTCATCGATGGACGCACGGGCGAGTCGTTCGATCGCCCGGTCACCGTCGGTTACATGCACATGCTCAAGCTCAACCACCTGGTCGACGACAAGATGCACGCCCGCTCCACGGGTCCGTACTCGCTGGTCACCCAGCAGCCACTCGGCGGCAAGGCCCAGTTCGGCGGACAGCGCTTCGGCGAAATGGAAGTCTGGGCACTGGAAGCTTACGGCGCCGCCTACACGCTGCAGGAAATGCTCACGGTCAAGTCCGATGACGTTTCCGGGCGCAACCAGATGTACAAGAACATCGTCGACGGCGACCACGAGATGGTGGCGGGCATGCCGGAGTCGTTCAACGTATTGGTCAAGGAAATCCGTTCGCTCGCGATCAACATCGAGCTGGACGAGATCAAGTCCAAGTGA
PROTEIN sequence
Length: 1387
MTYSFTEKKRIRKDFGKRPPVLDVPFLLAIQVDSYREFLQLEGDPNKREDKGLHAALQSVFPISSYAGHAALEYVSYRLGEPAFDERECRSRGMSYGAPLRVTVRLVIYDRESSNKAIKYVKEQEVYMGELPLMTDTGTFIVNGTERVIVSQLHRSPGVFFDHDRGKTHSSGKLLYSARVIPYRGSWLDFEFDPKDALFTRIDRRRKLPVTILLRALGYTNEQMLDIFFEHNVFHLGKKDGAELELVSERLRGETLNFDLRIGKDVIVEAGKRITARHVRQLESAKIKSLEVPDEYLIGRILANDIVDTKTGELLASANDEIDQTHVEAFRKAGIGRIATLWVNDLDRGPYISQTLRIDPSKTPLEALVEIYRMMRPGEPPTKDAAQNLFQNLFFSAERYDLDRVGRMKFNRRVGRKDDNGPGVLYDGRYFRDRNDETSKAMVKELGAGSDILDVLKVLIDIRNGRGTVDDIDHLGNRRVRSVGEMAENVFRIGLVRVERAVKERLSLAESEGLTPQELINAKPVAAAIKEFFGSSQLSQFMDQNNPLSEVTHKRRVSALGPGGLTRERAGFEVRDVHPTHYGRVCTIETPEGPNIGLINSLAVYARTNGYGFLETPYRKVAKGKITNEVEFLSAIDEGDHVIAQANSPLSKDGAFTEEFVSCRSHGESELRPPSDVEYMDVSPMQTVSVAAALVPFLEHDDANRALMGANMQRQAVPTLRAQTPVVGTGIERAVARDSGVIVAARRGGEIDQVDAARIVVRVREDQIGENDAGVDIYPLTKYTRSNQNTNLNQRPLVNVGDKVEIGDVLADGPSTDLGELALGQNMLVAFMPWNGYNFEDSILISERVVQEDRYTTIHIEELTCVARDTKLGPEEITADIPNVGEQALARLDESGVVYIGAEVKAGDILVGKVTPKGESQLTPEEKLLRAIFGEKASDVKDSSLRVPPGMDGTVIDVTVFTRDGIEKDKRARQIEEMEIKRIKKDFDDQFRILEGAIYNRLRSSILGKTVNGGPGGIKKGATLNDEYLDSLKRDEWFSIRMKDEDAAEMLERAQEQIKGHREEFDRRFKEKQAKITAGDDLAPGVLKMVKVYLAVKRRIQPGDKMAGRHGNKGVVSMIVPVEDMPYAADGRPVDIVLNPLGVPSRMNIGQILETHLGWAAKGLGEKIGKMLDANEKVGELRKFLDAIYNHDKDSFKQRVDLKSFSDDELLAMARNLRTGVPMATPVFDGAFESEIKAMLKLAGLPESGQTILIDGRTGESFDRPVTVGYMHMLKLNHLVDDKMHARSTGPYSLVTQQPLGGKAQFGGQRFGEMEVWALEAYGAAYTLQEMLTVKSDDVSGRNQMYKNIVDGDHEMVAGMPESFNVLVKEIRSLAINIELDEIKSK*