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scnpilot_p_inoc_scaffold_136_curated_11

Organism: scnpilot_dereplicated_Xanthomonadales_3

near complete RP 52 / 55 BSCG 51 / 51 ASCG 13 / 38
Location: 11097..11927

Top 3 Functional Annotations

Value Algorithm Source
Diaminopimelate epimerase {ECO:0000256|HAMAP-Rule:MF_00197, ECO:0000256|SAAS:SAAS00028055}; Short=DAP epimerase {ECO:0000256|HAMAP-Rule:MF_00197};; EC=5.1.1.7 {ECO:0000256|HAMAP-Rule:MF_00197, ECO:0000256|SAAS:SAAS00028063};; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 63.3
  • Coverage: 275.0
  • Bit_score: 348
  • Evalue 7.40e-93
diaminopimelate epimerase (EC:5.1.1.7) similarity KEGG
DB: KEGG
  • Identity: 63.3
  • Coverage: 275.0
  • Bit_score: 347
  • Evalue 4.80e-93
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI0003733A4A similarity UNIREF
DB: UNIREF100
  • Identity: 63.6
  • Coverage: 275.0
  • Bit_score: 350
  • Evalue 1.80e-93

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Taxonomy

Rhodanobacter thiooxydans → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 831
ATGGCCCTGGCGTTCAGCAAGATGCATGGCATTGGCAATGATTTTGTCGTGCTTGATTGCCGCCAGCATGCGTGCGCGCTGGATGCGGCGCAGATCCGCAAGATGGGTGATCGACACCTTGGCGTCGGCTTCGACCAGTTGCTGACCATCGAGCAGGATGAAACGGCCGATTGCGTGTTTCGCTACGCCATCTGGAACCGCGATGGTTCGCCCTCGGGCCAATGTGGCAACGGCGTGCGCTGCGTGGCTGCCTGGCTGGCCCGCGACGGCAGCCTGGAGGCGGGCCTGGTGCGCCTGATGAGTCCTTCTGGGCCGGTGCGCGTGGAAGTGCTCGCCGATGCACGCGTGCGCGTGGACATGGGTGAGCCGCGCTTCTCCCCGGCGGACGTGCCGTTTGCGGCAACCACGGAGTGCGATCGCTATCGCATCGATGTGGCGGGTCGCACGATCGAGATTGGCGCGGTGTCGATGGGCAATCCGCATGCGGTCATCGACGTCGCTGACGTCGATCAGGCCGAGGTCGGCGTGCTCGGCCCGCAACTCGCGCATGCCGAGGTATTTGCGCAAGGCTGCAACGTCGGCTTCGCGCAGATCCTTTCGCGTTCGGCCATCGCCCTGCGCGTGTGGGAGCGCGGCGTTGGCGAAACCCTGGGCTGTGGCAGCGGCGCCTGTGCGGCGATGGCCGTCATGCATCGGCGCAGGCAGGTCGATGACGAGGTGGAAATCCGCCTGCCGGGCGGTGCATTGTTGATCCAATGGCAGGGTCCGGGTCATCCCTTGTGGATGACCGGTCCCGCAACTTTCGTATTTGAAGGGGTATGGCATGAGTGA
PROTEIN sequence
Length: 277
MALAFSKMHGIGNDFVVLDCRQHACALDAAQIRKMGDRHLGVGFDQLLTIEQDETADCVFRYAIWNRDGSPSGQCGNGVRCVAAWLARDGSLEAGLVRLMSPSGPVRVEVLADARVRVDMGEPRFSPADVPFAATTECDRYRIDVAGRTIEIGAVSMGNPHAVIDVADVDQAEVGVLGPQLAHAEVFAQGCNVGFAQILSRSAIALRVWERGVGETLGCGSGACAAMAVMHRRRQVDDEVEIRLPGGALLIQWQGPGHPLWMTGPATFVFEGVWHE*