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SCNpilot_bf_inoc_scaffold_32_curated_85

Organism: scnpilot_dereplicated_Xanthomonadales_2

near complete RP 52 / 55 BSCG 51 / 51 ASCG 13 / 38
Location: 109218..109784

Top 3 Functional Annotations

Value Algorithm Source
ECF subfamily RNA polymerase sigma-24 subunit n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VX21_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 50.0
  • Coverage: 180.0
  • Bit_score: 163
  • Evalue 2.10e-37
RNA polymerase sigma factor {ECO:0000313|EMBL:AHG93514.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 52.2
  • Coverage: 182.0
  • Bit_score: 168
  • Evalue 1.20e-38
putative RNA polymerase sigma factor similarity KEGG
DB: KEGG
  • Identity: 47.8
  • Coverage: 180.0
  • Bit_score: 150
  • Evalue 4.50e-34

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Taxonomy

Gemmatimonadetes bacterium KBS708 → Gemmatimonadetes → Gemmatimonadetes → Bacteria

Sequences

DNA sequence
Length: 567
ATGCACGACGACGTGACCGCTTTGCTCGCCGCCGCCAATAGCGGCGACGGCGCCGCCCAGGACCGCCTGTTCACCCTGCTCTACGACGAACTGCGCCAGTGCGCACGGCATCAGCTGCGCGGCAATTTCGGACTGACGCTGTCGACGACCGCGCTGGTCAACGAGACCTACGTCAAGCTCGCCGCGGCCAGCCAGCTCAGCACGCGCACGCGCCAGCACTTCATGGCACTGGCCGCGCGCGCCATGCGCCAGGTCATGGTCGACCACGCGCGCCGCGTGCAGGCCGACAAGCGCGGCGGCGGCGCGGTCATGGTGACGCTCGACGAGCGTCTGCCGGAGGATCCCGCCGATGCGGTCGAAGTGCTCGCGCTGGATCAGGCCCTGAACACGCTGGAGCAGATCGACGAGCGCGCCGCGCGCGTCGTGCAGCTGCATTTCTTCGGCGGCCTCGCATTTCCCGAAGTCGCCGAGCTCGAGGGACTGACCGTGCGCACGGTCATGCGCGACTGGCAGGCGGCGCGGGCCCTGCTCGCGACCGAGATGGGCGCCGGCGCAACCGGCACATGA
PROTEIN sequence
Length: 189
MHDDVTALLAAANSGDGAAQDRLFTLLYDELRQCARHQLRGNFGLTLSTTALVNETYVKLAAASQLSTRTRQHFMALAARAMRQVMVDHARRVQADKRGGGAVMVTLDERLPEDPADAVEVLALDQALNTLEQIDERAARVVQLHFFGGLAFPEVAELEGLTVRTVMRDWQAARALLATEMGAGATGT*