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scnpilot_expt_750_bf_scaffold_349_curated_25

Organism: scnpilot_dereplicated_Sphingobacteriales_8

near complete RP 53 / 55 MC: 1 BSCG 51 / 51 ASCG 13 / 38
Location: 37899..38462

Top 3 Functional Annotations

Value Algorithm Source
Uncharacterized protein {ECO:0000313|EMBL:KIC96220.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 53.3
  • Coverage: 180.0
  • Bit_score: 199
  • Evalue 4.90e-48
ECF subfamily RNA polymerase sigma-24 subunit; K03088 RNA polymerase sigma-70 factor, ECF subfamily similarity KEGG
DB: KEGG
  • Identity: 36.3
  • Coverage: 182.0
  • Bit_score: 142
  • Evalue 1.20e-31
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TDI6_NIAKG similarity UNIREF
DB: UNIREF100
  • Identity: 36.3
  • Coverage: 182.0
  • Bit_score: 142
  • Evalue 3.90e-31

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Taxonomy

Flavihumibacter solisilvae → Flavihumibacter → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 564
GTGAGCGTATCCAAAGGCGATGAAACTTCATTTAAAATATTATTTGAAGCTCACTGGGACAGAATATACAGCGTAGCTTTTACTTTTACCAAATCGGCAATGATAGCCGAGGAAATGGTGCAGGATGTGTTTGTAAAGATCTGGCTCCGCAGAACAGAACTGTCCTCCGTAAGAAAATTCAGCGACTATCTTTTTATCGTAGCAAGAAACCATATATTAAGCGTGCTCCGGAAAAAAATAATGGAAGAGCCTTTTGCAGAGCACCTTTCAGAATATTTCAAAGACATTTCCAATATGCCCGACCAGCAATTGCTGCGCAGGGAAACAGAAGCGCTCGTTTTGCAGGCAGTCGAAAAATTACCTCATCAGCAACAAATGGTATATACACTAAGCCGGCAGCAGGGACTAAGCCTTGATGAGATCGCCTCAAGACTTTCCATATCAAAGCATACCGTAAAATCGCACATGAGCAAAGCGCTGCATTTTATCCGCCAGTACCTTCATACACATTCAGATGTAGGAGTTATTACCGTTTTCTATTGCATCATTTCCGGTGTGTTGTAG
PROTEIN sequence
Length: 188
VSVSKGDETSFKILFEAHWDRIYSVAFTFTKSAMIAEEMVQDVFVKIWLRRTELSSVRKFSDYLFIVARNHILSVLRKKIMEEPFAEHLSEYFKDISNMPDQQLLRRETEALVLQAVEKLPHQQQMVYTLSRQQGLSLDEIASRLSISKHTVKSHMSKALHFIRQYLHTHSDVGVITVFYCIISGVL*