ggKbase home page

SCNpilot_cont_300_bf_scaffold_4419_curated_27

Organism: scnpilot_dereplicated_Caulobacterales_1

partial RP 38 / 55 BSCG 39 / 51 MC: 1 ASCG 10 / 38 MC: 2
Location: 23253..23702

Top 3 Functional Annotations

Value Algorithm Source
Uncharacterized protein {ECO:0000313|EMBL:KDD71136.1}; TaxID=1419583 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas mandelii PD30.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 45.1
  • Coverage: 153.0
  • Bit_score: 132
  • Evalue 5.90e-28
TetR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 38.4
  • Coverage: 151.0
  • Bit_score: 117
  • Evalue 4.40e-24
Transcriptional regulator, TetR family n=1 Tax=Sphingopyxis alaskensis (strain DSM 13593 / LMG 18877 / RB2256) RepID=Q1GX19_SPHAL similarity UNIREF
DB: UNIREF100
  • Identity: 38.4
  • Coverage: 151.0
  • Bit_score: 117
  • Evalue 1.40e-23

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Pseudomonas mandelii → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 450
GTGCCAAACGGCTCGCTGTTCACCTACTTCGAGACCAAGTCCGACCTGCTCAACGCCCTGTATCTGGCGCTCAAGCAGCACCTCACCGAACAGGTGCTGCGCGATCTTCCGACCGGCGACGACAAGGCCGCCCTGCGCCACCTCTGGACGGTGTGGATCGACTGGGGCCTGCAGCACGCGCCTCGCCGCAAGGCCCTCGCCCAGCTCAGCGTCTCCGATCAGATCTCCGACGTCAGCCGTCGCACGGCCTCGGAGTTCGCCGGCCCCACGGTCGAACTGGTTGTGCGCATCAGCGCCACCGGCGCGCTCCGCGGCGCCCCCGCCCGCTACATCGGCGGCCTCGTCGAGGCGGCGGTTGGCGTCACCACCGAGTTCATCAGCGCCCACCCGGAAAACGCCGAGGCCATCGCCGACGCCGGCTTCGAAGCGCTGTGGAAGAGTCTGTCCTAG
PROTEIN sequence
Length: 150
VPNGSLFTYFETKSDLLNALYLALKQHLTEQVLRDLPTGDDKAALRHLWTVWIDWGLQHAPRRKALAQLSVSDQISDVSRRTASEFAGPTVELVVRISATGALRGAPARYIGGLVEAAVGVTTEFISAHPENAEAIADAGFEALWKSLS*