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SCNpilot_cont_300_bf_scaffold_3194_curated_18

Organism: scnpilot_dereplicated_Caulobacterales_1

partial RP 38 / 55 BSCG 39 / 51 MC: 1 ASCG 10 / 38 MC: 2
Location: 16942..18570

Top 3 Functional Annotations

Value Algorithm Source
Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_69_31_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 47.7
  • Coverage: 413.0
  • Bit_score: 334
  • Evalue 2.80e-88
RND family efflux transporter similarity KEGG
DB: KEGG
  • Identity: 50.8
  • Coverage: 354.0
  • Bit_score: 326
  • Evalue 2.30e-86
  • rbh
Efflux transporter, RND family, MFP subunit n=1 Tax=Caulobacter segnis (strain ATCC 21756 / DSM 7131 / JCM 7823 / NBRC 15250 / LMG 17158 / TK0059) RepID=D5VKV4_CAUST similarity UNIREF
DB: UNIREF100
  • Identity: 50.8
  • Coverage: 354.0
  • Bit_score: 326
  • Evalue 7.20e-86
  • rbh

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Taxonomy

R_Phenylobacterium_69_31 → Caulobacterales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1629
ATGCGACGACACTACTTTTTGATCTCGGCAGTGGTGATCGTGCTGCTGATGCTGGTGGCGGCGGGCGCGCGTCTGTTGATCTTCAAGCCGCAACGGGCGGGCCCGGGCGGCGCGGGCGGTTTTGCTGGTGCGGCGGGCGGTCCCGGCGGCGCCGGTGGTCCGGGCGCCGGTGGTCCTGGCGCGGCGGGCGGTCAACAGCGTCAAGCCGGCGGGGCGGGCGGCTTCGGTGGCGCGGCAGGCGGCTTCCGCGGCGGCGGCACCCAGGTCACTTCGATGACCGTTCCCACCCACACCTTCACCGATCGGATCGATGTGCTCGGCGTGGCCAAGGGCCGTCAGTCCGTGACCCTCACCTCCAACACGACCCAGCTGGTCACCGCCATCCGTTTCCGTGACGGTCAGTCGGTCAACCGCGGCCAGGTGCTCGTCGAGCTGCGCGCCACCGAACAGGACGCCGGCGTTGATCAAGCCCAGGCCGCTCTCGAAGCCGCTCGCCTCAACTTCGAACGCTGGAACACCCTGGCTGAGAAGGGCATCGCCGCCCCGGCCACGCGTGAGACCTATCGTGCGTCCTATGATCAGGCCAAGGCTGGCCTCGCCGCCGCTGAAGCCCGTCGTGGCGACCGTGAAATCCGCGCGCCGTTCAGCGGTGTGATCGGTCTGTCGGACGTTGCGCCCGGCGCCCTGATTAACCCGGGCACCGCCATCGCCACCCTCGACGACCTGTCGGTGGTCCGCGTCGACTTCGATATTCCTGATCGCTTCCTGTCGCGTCTGCGGAAGGGCACGCCGATCATCGCGCGGTCTGAGTCCTTCCCGGGCCAGACCTTCGCCGGCGTCATCGCCGAGATCGACACCCGCGTGAACGAGCGCACCCGCTCGATCAAGGCGCGGGCTGAACTGCCGAACCGCGCCAACCTGCTGAAGCCCGGCATGCTGATGCGCGTGGGCATCGAAGAATCCAGCCGTCAGGCGCTGGCGGCGCCGGAAGCCGCCGTGCAGTTCGACGCCGACCAGGCCTTCGTCTTCGTCCTTCACCGGGGCGCCCGTCCTCAGGGCGCCGGTCAGCAGGGGCAACGCCAACCTGGCCAGGCTGGTCAAGGCGGCGCTCAGGGCGGTCAAGGTTTCGGCGCCCAAGGCGGCGGTCAGCGTCCCAACGGCGCCGGAGCTGGCGGTGCCCCGCGTGGGATGCCGGCCACGGTTGAACGGCGCGTCGTCGTCGCCGGCCAGCGTCAGGACGGCTTCGTGGAGATCCGCAGCGGCATCGAGCCGGGCGAACAGATCGTCGCCGACGGCGTGAACCGCCTGCAAGCTAACCAGTCCGTGCTCATCACCGCCCGTGCGGGTGGTCCGGCCGGCGGTCAGCCCGGTCAGGGCGGCCGTCAAGGCGCGGGCCCCGGCCAGGCTGGTGGCGGTGCGCAGGGCGCGGCTCCGGCCGGCCAGCGCGGCCCGGGCCAACGCGGCCCCGGCCAGGGTGCCGCGGCTGCGGGCTTCTCGCCGAACGCTCCCGGAGGCCAGGGCGCTCGTCCGGCGGGCGCCGGCGGCCCAAATGGTGGTTTCAACGGCGAACGTCGCCGTCCCGATGGTCAAGGCGGCGGGCAACGCCCCGCGGCTGCGGCCGGCGCCTGA
PROTEIN sequence
Length: 543
MRRHYFLISAVVIVLLMLVAAGARLLIFKPQRAGPGGAGGFAGAAGGPGGAGGPGAGGPGAAGGQQRQAGGAGGFGGAAGGFRGGGTQVTSMTVPTHTFTDRIDVLGVAKGRQSVTLTSNTTQLVTAIRFRDGQSVNRGQVLVELRATEQDAGVDQAQAALEAARLNFERWNTLAEKGIAAPATRETYRASYDQAKAGLAAAEARRGDREIRAPFSGVIGLSDVAPGALINPGTAIATLDDLSVVRVDFDIPDRFLSRLRKGTPIIARSESFPGQTFAGVIAEIDTRVNERTRSIKARAELPNRANLLKPGMLMRVGIEESSRQALAAPEAAVQFDADQAFVFVLHRGARPQGAGQQGQRQPGQAGQGGAQGGQGFGAQGGGQRPNGAGAGGAPRGMPATVERRVVVAGQRQDGFVEIRSGIEPGEQIVADGVNRLQANQSVLITARAGGPAGGQPGQGGRQGAGPGQAGGGAQGAAPAGQRGPGQRGPGQGAAAAGFSPNAPGGQGARPAGAGGPNGGFNGERRRPDGQGGGQRPAAAAGA*