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SCNpilot_expt_1000_bf_scaffold_9867_curated

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Displaying 6 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_9867_curated_1
Geoalkalibacter ferrihydriticus, Geoalkalibacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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177..1703
DNA (1527bp) protein (509aa)
glycoside hydrolase family 57 n=1 Tax=Desulfospira joergensenii RepID=UPI0003B666BF rbh
Glycoside hydrolase family 57 {ECO:0000313|EMBL:KIH75710.1}; TaxID=1121915 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geoalkalibacter.;" source="Geoalkalibacter ferrihydriticus DSM 17813.;"
glycoside hydrolase family protein rbh
SCNpilot_expt_1000_bf_scaffold_9867_curated_2
Geobacter metallireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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1700..2182
DNA (483bp) protein (161aa)
glycoside hydrolase family protein
Uncharacterized protein n=1 Tax=Geobacter metallireducens (strain GS-15 / ATCC 53774 / DSM 7210) RepID=Q39YI3_GEOMG
Uncharacterized protein {ECO:0000313|EMBL:ABB30691.1}; TaxID=269799 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter metallireducens (strain GS-15 / ATCC 53774 / DSM 7210).;"
SCNpilot_expt_1000_bf_scaffold_9867_curated_3
DS1215_Halomonas_54_146, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

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2259..3704
DNA (1446bp) protein (482aa)
mannose-1-phosphate guanylyltransferase (GDP) (EC:2.7.7.22); K16011 mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase [EC:2.7.7.13 5.3.1.8] rbh
Tax=DS1215_Halomonas_54_146
Mannose-1-phosphate guanylyltransferase (GDP) n=2 Tax=Rhodospirillum rubrum RepID=Q2RMK3_RHORT rbh
SCNpilot_expt_1000_bf_scaffold_9867_curated_4
Hyphomonas sp. CY54-11-8, Hyphomonas, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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3864..4250
DNA (387bp) protein (129aa)
Aminotransferase DegT {ECO:0000313|EMBL:KCZ47279.1}; TaxID=1280944 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Hyphomonadaceae; Hyphomonas.;" source="Hyphomonas sp. CY54-11-8.;"
putative PLP-dependent enzyme possibly involved in cell wall biogenesis
Putative PLP-dependent enzyme possibly involved in cell wall biogenesis n=1 Tax=Mesorhizobium australicum (strain LMG 24608 / HAMBI 3006 / WSM2073) RepID=L0KTL6_MESAW
SCNpilot_expt_1000_bf_scaffold_9867_curated_5
RLO_Rhodospirillales_58_28, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4514..5014)
DNA (501bp) protein (167aa)
Tax=RIFCSPLOWO2_12_FULL_Rhodospirillales_58_28_curated
Capsular polysaccharide biosynthesis protein CapD n=1 Tax=Acetobacter pomorum DM001 RepID=F1YUJ0_9PROT
nucleotide sugar epimerase dehydratase protein; K13013 O-antigen biosynthesis protein WbqV
SCNpilot_expt_1000_bf_scaffold_9867_curated_6
Rhodospirillum centenum, Rhodospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4972..6066)
DNA (1095bp) protein (365aa)
capD; polysaccharide biosynthesis protein CapD; K13013 O-antigen biosynthesis protein WbqV
Polysaccharide biosynthesis protein CapD, putative n=1 Tax=Rhodospirillum centenum (strain ATCC 51521 / SW) RepID=B6IMY1_RHOCS
Polysaccharide biosynthesis protein CapD, putative {ECO:0000313|EMBL:ACI98878.1}; TaxID=414684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Rhodospirillum.;" source="Rhodospirillum centenum (strain ATCC 51521 / SW).;"
Displaying 6 items

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