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SCNpilot_expt_1000_bf_scaffold_7031_curated

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_7031_curated_1
R_Betaproteobacteria_67_26, Betaproteobacteria, Proteobacteria, Bacteria

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comp(1..405)
DNA (405bp) protein (135aa)
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_67_26_curated
RNA methylase
RNA methylase family UPF0020 family protein n=1 Tax=Achromobacter xylosoxidans (strain A8) RepID=E3HFP3_ACHXA
SCNpilot_expt_1000_bf_scaffold_7031_curated_2
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(449..1789)
DNA (1341bp) protein (447aa)
amino acid permease rbh
Amino acid permease-associated region n=1 Tax=Rhodopseudomonas palustris (strain DX-1) RepID=E6VE86_RHOPX rbh
Amino acid permease-associated region {ECO:0000313|EMBL:ADU42817.1}; TaxID=652103 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain DX-1).;"
SCNpilot_expt_1000_bf_scaffold_7031_curated_3
unknown

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comp(1938..3047)
DNA (1110bp) protein (370aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_7031_curated_4
R_Alphaproteobacteria_46_13, Alphaproteobacteria, Proteobacteria, Bacteria

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3836..5041
DNA (1206bp) protein (402aa)
Tax=RIFCSPHIGHO2_02_FULL_Alphaproteobacteria_46_13_curated
Drug resistance transporter, Bcr/CflA subfamily n=1 Tax=Rheinheimera sp. A13L RepID=F7NW26_9GAMM rbh
bicyclomycin resistance protein; K07552 MFS transporter, DHA1 family, bicyclomycin/chloramphenicol resistance protein rbh
SCNpilot_expt_1000_bf_scaffold_7031_curated_5
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

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comp(5091..6236)
DNA (1146bp) protein (382aa)
Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
lldD; L-lactate dehydrogenase (FMN-dependent)-like alpha-hydroxy acid dehydrogenases (EC:1.1.2.3); K00101 L-lactate dehydrogenase (cytochrome) [EC:1.1.2.3] rbh
L-lactate dehydrogenase (FMN-dependent)-like alpha-hydroxy acid dehydrogenases n=1 Tax=Prochlorococcus marinus (strain MIT 9211) RepID=A9BCT8_PROM4 rbh
SCNpilot_expt_1000_bf_scaffold_7031_curated_6
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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6312..8276
DNA (1965bp) protein (655aa)
quinoprotein glucose dehydrogenase n=1 Tax=Sphingomonas phyllosphaerae RepID=UPI0003B5E81B rbh
Quinoprotein glucose dehydrogenase {ECO:0000313|EMBL:AJP72668.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;"
gcd; quinoprotein glucose dehydrogenase (EC:1.1.5.2); K00117 quinoprotein glucose dehydrogenase [EC:1.1.5.2] rbh
SCNpilot_expt_1000_bf_scaffold_7031_curated_7
Caulobacter vibrioides, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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8427..8711
DNA (285bp) protein (95aa)
hypothetical protein; K04758 ferrous iron transport protein A
Uncharacterized protein n=1 Tax=Caulobacter crescentus (strain ATCC 19089 / CB15) RepID=Q9AA95_CAUCR
Uncharacterized protein {ECO:0000313|EMBL:AAK22696.1}; TaxID=190650 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter crescentus (strain ATCC 19089 / CB15).;"
SCNpilot_expt_1000_bf_scaffold_7031_curated_8
RIFOXYB1_FULL_Caulobacterales_67_16_curated, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(8902..9453)
DNA (552bp) protein (184aa)
Tax=RIFOXYB1_FULL_Caulobacterales_67_16_curated
SCNpilot_expt_1000_bf_scaffold_7031_curated_9
Brevundimonas subvibrioides, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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9549..9947
DNA (399bp) protein (133aa)
ferrous iron transporter B; K04759 ferrous iron transport protein B
Ferrous iron transport protein B n=1 Tax=Brevundimonas subvibrioides (strain ATCC 15264 / DSM 4735 / LMG 14903 / NBRC 16000 / CB 81) RepID=D9QGI4_BRESC
Ferrous iron transport protein B {ECO:0000313|EMBL:ADL00800.1}; TaxID=633149 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas subvibrioides (strain ATCC 15264 / DSM 4735 / LMG 14903; / NBRC 16000 / CB 81) (Caulobacter subvibrioides).;"
Displaying 9 items

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