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SCNpilot_expt_1000_bf_scaffold_10700_curated

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Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_10700_curated_1
Shewanella baltica, Shewanella, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2..805)
DNA (804bp) protein (268aa)
fructokinase; K00847 fructokinase [EC:2.7.1.4]
ROK family protein n=3 Tax=Shewanella baltica RepID=A6WLD1_SHEB8
Fructokinase {ECO:0000313|EMBL:AEG12097.1}; EC=2.7.1.4 {ECO:0000313|EMBL:AEG12097.1};; TaxID=693974 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Shewanellaceae; Shewanella.;" source="Shewanella baltica BA175.;"
SCNpilot_expt_1000_bf_scaffold_10700_curated_2
Bradyrhizobium sp. STM 3843, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(898..1167)
DNA (270bp) protein (90aa)
hypothetical protein n=1 Tax=Methyloferula stellata RepID=UPI0003788C1F
Uncharacterized protein {ECO:0000313|EMBL:CCE05385.1}; TaxID=551947 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. STM 3843.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_10700_curated_3
Methyloceanibacter caenitepidi, Methyloceanibacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1266..1640
DNA (375bp) protein (125aa)
Chemotaxis protein CheV {ECO:0000313|EMBL:BAQ17668.1}; TaxID=1384459 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methyloceanibacter.;" source="Methyloceanibacter caenitepidi.;"
chemotaxis protein CheY n=1 Tax=Fodinicurvata sediminis RepID=UPI0003B77519
response regulator receiver protein; K11443 two-component system, cell cycle response regulator DivK
SCNpilot_expt_1000_bf_scaffold_10700_curated_4
Parvibaculum lavamentivorans, Parvibaculum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1725..3053
DNA (1329bp) protein (443aa)
response regulator receiver modulated diguanylate cyclase; K02488 two-component system, cell cycle response regulator rbh
Response regulator receiver modulated diguanylate cyclase n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HWZ0_PARL1 rbh
Response regulator receiver modulated diguanylate cyclase {ECO:0000313|EMBL:ABS64423.1}; TaxID=402881 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Parvibaculum.;" source="Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966).;"
SCNpilot_expt_1000_bf_scaffold_10700_curated_5
alpha proteobacterium MA2, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3101..3787)
DNA (687bp) protein (229aa)
DSBA oxidoreductase {ECO:0000313|EMBL:GAK43945.1}; TaxID=1333998 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium MA2.;"
DSBA oxidoreductase n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HSR4_9RHIZ
DSBA oxidoreductase
SCNpilot_expt_1000_bf_scaffold_10700_curated_6
unknown

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comp(3829..4194)
DNA (366bp) protein (122aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_10700_curated_7
Parvibaculum lavamentivorans, Parvibaculum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5004..5360)
DNA (357bp) protein (119aa)
iron-sulfur cluster assembly accessory protein
Iron-sulfur cluster assembly accessory protein n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HXJ4_PARL1
Iron-sulfur cluster assembly accessory protein {ECO:0000313|EMBL:ABS64627.1}; TaxID=402881 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Parvibaculum.;" source="Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966).;"
SCNpilot_expt_1000_bf_scaffold_10700_curated_8
Magnetospira sp. QH-2, Magnetospira, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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5406..5648
DNA (243bp) protein (81aa)
Deoxyguanosinetriphosphate triphosphohydrolase-like protein {ECO:0000256|HAMAP-Rule:MF_01212}; TaxID=1288970 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospira.;" source="Magnetospira sp. QH-2.;"
Deoxyguanosinetriphosphate triphosphohydrolase-like protein n=1 Tax=Nitratireductor indicus C115 RepID=K2PIL4_9RHIZ
Deoxyguanosinetriphosphate triphosphohydrolase-like protein; K01129 dGTPase [EC:3.1.5.1]
Displaying 8 items

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