ggKbase home page

SCNpilot_expt_1000_bf_scaffold_8237_curated

Search features with annotation key words

Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_8237_curated_1

Not on your lists

1..297
DNA (297bp) protein (99aa)
Putative resistance protein YegO (Fragment) n=1 Tax=uncultured bacterium RepID=Q84CV4_9BACT
Putative resistance protein YegO {ECO:0000313|EMBL:AAO91900.1}; Flags: Fragment;; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
mdtC; transmembrane drug efflux pump; K07789 RND superfamily, multidrug transport protein MdtC
SCNpilot_expt_1000_bf_scaffold_8237_curated_2

Not on your lists

comp(525..1382)
DNA (858bp) protein (286aa)
Lipoprotein VacJ n=1 Tax=uncultured bacterium RepID=Q84CV5_9BACT
Lipoprotein VacJ {ECO:0000313|EMBL:AAO91899.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
VacJ family lipoprotein; K04754 lipoprotein
SCNpilot_expt_1000_bf_scaffold_8237_curated_3
Skermanella aerolata, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1649..2221)
DNA (573bp) protein (191aa)
3-oxoacyl-ACP reductase {ECO:0000313|EMBL:KJB93340.1}; TaxID=1385368 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella aerolata KACC 11604.;"
Short-chain dehydrogenase n=1 Tax=Oceanibaculum indicum P24 RepID=K2JMB8_9PROT
short-chain dehydrogenase/reductase SDR
SCNpilot_expt_1000_bf_scaffold_8237_curated_4
unknown

Not on your lists

comp(2251..2388)
DNA (138bp) protein (46aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_8237_curated_5
unknown

Not on your lists

comp(2559..2810)
DNA (252bp) protein (84aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_8237_curated_6
unknown

Not on your lists

comp(3211..4146)
DNA (936bp) protein (312aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_8237_curated_7
Caulobacter sp. K31, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4376..5260
DNA (885bp) protein (295aa)
TonB-dependent receptor plug
TonB-dependent receptor plug n=1 Tax=Caulobacter sp. (strain K31) RepID=B0T3R5_CAUSK
TonB-dependent receptor plug {ECO:0000313|EMBL:ABZ72379.1}; Flags: Precursor;; TaxID=366602 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter sp. (strain K31).;"
SCNpilot_expt_1000_bf_scaffold_8237_curated_8
RIFCSPLOWO2_12_FULL_Bacteroidetes_31_6_curated, Bacteroidetes, Bacteria

Not on your lists

comp(5390..5908)
DNA (519bp) protein (173aa)
hypothetical protein n=1 Tax=Kordiimonas gwangyangensis RepID=UPI00036082B6
Tax=RIFCSPLOWO2_12_FULL_Bacteroidetes_31_6_curated
fklB; peptidyl-prolyl cis-trans isomerase; K03773 FKBP-type peptidyl-prolyl cis-trans isomerase FklB [EC:5.2.1.8]
SCNpilot_expt_1000_bf_scaffold_8237_curated_9
Caulobacter vibrioides, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6014..7213)
DNA (1200bp) protein (400aa)
RND family efflux transporter, MFP subunit n=1 Tax=Caulobacter crescentus OR37 RepID=R0EBT0_CAUCE rbh
RND family efflux transporter, MFP subunit {ECO:0000313|EMBL:ENZ82938.1}; TaxID=1292034 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter crescentus OR37.;"
RND efflux system membrane fusion protein rbh
SCNpilot_expt_1000_bf_scaffold_8237_curated_10
Caulobacter vibrioides, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7206..10406)
DNA (3201bp) protein (1067aa)
Cation/multidrug efflux pump {ECO:0000313|EMBL:ENZ82937.1}; TaxID=1292034 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter crescentus OR37.;"
Cation/multidrug efflux pump n=1 Tax=Caulobacter crescentus OR37 PF2_CAUCE">RepID=R0EPF2_CAUCE rbh
acriflavin resistance protein rbh
SCNpilot_expt_1000_bf_scaffold_8237_curated_11
alpha proteobacterium U9-1i, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10620..11054
DNA (435bp) protein (145aa)
Rrf2 family transcriptional regulator {ECO:0000313|EMBL:GAM96776.1}; TaxID=1605283 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium U9-1i.;"
BadM/Rrf2 family transcriptional regulator
Transcriptional regulator, BadM/Rrf2 family n=1 Tax=Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB 9469) RepID=Q11YM7_CYTH3
SCNpilot_expt_1000_bf_scaffold_8237_curated_12
Herbaspirillum sp. TSA66, Herbaspirillum, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11191..11889
DNA (699bp) protein (233aa)
Uncharacterized protein {ECO:0000313|EMBL:KIF80685.1}; TaxID=709839 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Herbaspirillum.;" source="Herbaspirillum sp. TSA66.;"
hypothetical protein n=1 Tax=Caldimonas manganoxidans RepID=UPI000368D795 rbh
sbp; sulfate ABC transporter substrate-binding protein; K02048 sulfate transport system substrate-binding protein rbh
Displaying 12 items

View Taxonomy