ggKbase home page

SCNpilot_expt_1000_bf_scaffold_5243_curated_2

Organism: scnpilot_dereplicated_Alphaproteobacteria_4

partial RP 35 / 55 BSCG 32 / 51 MC: 1 ASCG 8 / 38 MC: 1
Location: comp(553..1281)

Top 3 Functional Annotations

Value Algorithm Source
extensin-like protein similarity KEGG
DB: KEGG
  • Identity: 47.1
  • Coverage: 242.0
  • Bit_score: 215
  • Evalue 2.50e-53
Extensin-like n=1 Tax=Rhodospirillum rubrum (strain ATCC 11170 / NCIB 8255) RepID=Q2RTT4_RHORT similarity UNIREF
DB: UNIREF100
  • Identity: 47.1
  • Coverage: 242.0
  • Bit_score: 215
  • Evalue 8.00e-53
Extensin-like {ECO:0000313|EMBL:ABC22461.1}; TaxID=269796 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Rhodospirillum.;" source="Rhodospirillum rubrum (strain ATCC 11170 / ATH 1.1.1 / DSM 467 / LMG; 4362 / NCIB 8255 / S1).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 47.1
  • Coverage: 242.0
  • Bit_score: 215
  • Evalue 1.10e-52

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Rhodospirillum rubrum → Rhodospirillum → Rhodospirillales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 729
ATGAAAGCGGCGCCGTCCGGTCCCGCCGTGATGCTGGCGGCACTTGTCGCGCTGCTGCTGGTGGGGGTGGGCTGGTTTCTCCGCAACGAAGACAGTTTTCCGCCCAACAGCCTGCCCTGGAAGCCCGTGGTGCTGGATGCGCCGCCGGGTTGGATCGCGCACTGGCAGATGGGGCGGCTGAAGGCCGACCGCGACACCTGCCGGGCGGCGCTGGCCACCGCGTCGCGGCTGCGGTTCGAGCCGCTGAAGGACCGGGCGATGGGCGCGGCGTGCGGCTTCGACAATGTGGTGCGGGCCGACGCCGGTCCAGTGGCATTTACGCCGCGCGTCACCGCCACCTGCGCGATGCAGGCGGCGCTTTACTGGTATCAGCGCCAGCTTGCCGCTCCTGCCCTGGCGCATATGCAATCGCCGCTGGTGCGGATCACCCAACTCGGCACCTTTTCCTGCCGCAACGTCAATAACGGGCAAGGCAATAACGAACAGGATGGCCGCCGCAGCGAACATGCCGCCGCCAACGCCATAGACATTGCCGTCTTCCATTTCGCCGACGGCCGCAGTGTGTCGGTGCTGCGCGATTACGCAAAGGATACCGCCCAGGGCCGTTTCCTGGCGGCGGCGCGGGACGAAGCGTGCCGTGTGTTCAACGCCGTTCTGGGGCCGGACTATAACCGGCTGCACGCCGACCATTTCCATCTGGATATGGGAGGCGCGCGCATCTGTTCGTGA
PROTEIN sequence
Length: 243
MKAAPSGPAVMLAALVALLLVGVGWFLRNEDSFPPNSLPWKPVVLDAPPGWIAHWQMGRLKADRDTCRAALATASRLRFEPLKDRAMGAACGFDNVVRADAGPVAFTPRVTATCAMQAALYWYQRQLAAPALAHMQSPLVRITQLGTFSCRNVNNGQGNNEQDGRRSEHAAANAIDIAVFHFADGRSVSVLRDYAKDTAQGRFLAAARDEACRVFNAVLGPDYNRLHADHFHLDMGGARICS*