ggKbase home page

SCNpilot_expt_1000_bf_scaffold_10292_curated_2

Organism: scnpilot_dereplicated_Alphaproteobacteria_4

partial RP 35 / 55 BSCG 32 / 51 MC: 1 ASCG 8 / 38 MC: 1
Location: comp(469..1515)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Methylopila sp. M107 RepID=UPI0003707921 similarity UNIREF
DB: UNIREF100
  • Identity: 55.2
  • Coverage: 348.0
  • Bit_score: 386
  • Evalue 2.90e-104
  • rbh
tig; trigger factor; K03545 trigger factor similarity KEGG
DB: KEGG
  • Identity: 53.2
  • Coverage: 346.0
  • Bit_score: 381
  • Evalue 2.20e-103
  • rbh
Trigger factor {ECO:0000255|HAMAP-Rule:MF_00303}; Short=TF {ECO:0000255|HAMAP-Rule:MF_00303};; EC=5.2.1.8 {ECO:0000255|HAMAP-Rule:MF_00303};; PPIase {ECO:0000255|HAMAP-Rule:MF_00303}; TaxID=402881 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Parvibaculum.;" source="Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 53.2
  • Coverage: 346.0
  • Bit_score: 381
  • Evalue 9.90e-103

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Parvibaculum lavamentivorans → Parvibaculum → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1047
GTGGACGGCAAGGCCGACCTCACCTGCAAGGTGATCGTGGACCTGATGCCGGATTTCGAGACCGCCGACGTTTCCAAGATCACGGTGGAGAAGATCACGTCCGACATCACCGACGCCGATATCGACGAGGCGCTGGATCGTCTGGCCAAGAGCGTGCGCAACTATGTCAATCGCCCGGAAGGCTCGGAAGCCCGCAAGGACGACATCGCGGTGATCGACTATCTGGGCAGCGTGGATGGTGTGCCGTTCGACGGCGGCGCGGGCAACGATTATGCCCTGACTCTGGGTTCGGGCACCTTCATTCCCGGCTTCGAGGACCAGGTGATCGGCGCCAAGGCGGGCGAGCAGCGCGATGTGAAGGTGACGTTCCCCACCGAATATCACGCCCCCGACCTGGCCGGTAAGGAAGCCGTCTTCGCCGTCACCGTGAAAGAGGTGAAGGAAGCCGAGGAAACCAAGATCGACGACGAACTGGCCAAGAAGCTGGGCCTGGACGATCTGTCCGCCCTCAAGGAGCGCGTGCGCGAGCAGCTCAAGAGCGATTTCGCCACCGCCGGCCGGATGCACCTCAAGCGCCGGGTGTTGGACGCGCTGGACGCCTCCCACACCTTCCCGCTGCCGCCCGCGATGGTCGAGCACGAGTTCGCCAACATCTGGGCCCAGGTCGAGGACGAGCTGAAGCGCGAAGGCAAGACCGCCGCCGACGAGGGCAAGACCGAGGACGAACTCAAGGACGAGTATCGCAAGATCGCCGAGCGCCGCGTCCGTCTGGGCCTGGTCCTGGGCAAGCTGGGTGAGCAGAACGGCATCACCGTCCAGAATGACGAGGTGCAGCGCGCCATTCTGAATCGCGCCCGCCAGTTCCCCGGCCAGGAGCAGCAGGTGTTCCAGTTCTACGCCAGCAACGCCCAGGCCCAGGCGGAAATCCGCGCCCCCCTCTATGAGGACAAGGTGGTGGACTTCATCGTCGAACTGGCCACCGTCAATGAGCGCAAGGTGGACCGCGAGACGCTGTTCGCCGATCCCGAGGATGAACCGGCGAAGTAA
PROTEIN sequence
Length: 349
VDGKADLTCKVIVDLMPDFETADVSKITVEKITSDITDADIDEALDRLAKSVRNYVNRPEGSEARKDDIAVIDYLGSVDGVPFDGGAGNDYALTLGSGTFIPGFEDQVIGAKAGEQRDVKVTFPTEYHAPDLAGKEAVFAVTVKEVKEAEETKIDDELAKKLGLDDLSALKERVREQLKSDFATAGRMHLKRRVLDALDASHTFPLPPAMVEHEFANIWAQVEDELKREGKTAADEGKTEDELKDEYRKIAERRVRLGLVLGKLGEQNGITVQNDEVQRAILNRARQFPGQEQQVFQFYASNAQAQAEIRAPLYEDKVVDFIVELATVNERKVDRETLFADPEDEPAK*