ggKbase home page

SCNpilot_expt_1000_bf_scaffold_13902_curated_2

Organism: scnpilot_dereplicated_Alphaproteobacteria_4

partial RP 35 / 55 BSCG 32 / 51 MC: 1 ASCG 8 / 38 MC: 1
Location: comp(984..1301)

Top 3 Functional Annotations

Value Algorithm Source
Thioredoxin {ECO:0000256|PIRNR:PIRNR000077}; TaxID=1458461 species="Bacteria; Proteobacteria; Alphaproteobacteria; Candidatus Phaeomarinobacter.;" source="Candidatus Phaeomarinobacter ectocarpi.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 76.5
  • Coverage: 102.0
  • Bit_score: 172
  • Evalue 3.60e-40
thioredoxin (EC:5.3.4.1); K03671 thioredoxin 1 similarity KEGG
DB: KEGG
  • Identity: 74.5
  • Coverage: 102.0
  • Bit_score: 170
  • Evalue 3.10e-40
Thioredoxin n=2 Tax=Rhodospirillum rubrum RepID=G2TDG2_RHORU similarity UNIREF
DB: UNIREF100
  • Identity: 74.5
  • Coverage: 102.0
  • Bit_score: 170
  • Evalue 9.80e-40

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Candidatus Phaeomarinobacter ectocarpi → Candidatus Phaeomarinobacter → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 318
ATGCCGCTGAAAGTCTCCGACGCCTCGTTCCAGGCCGATGTTCTGGATTCCAAAAAGCCCGTCCTGGTGGACTTCTGGGCGGAATGGTGCGGCCCCTGCCGCATGATCGCCCCGGCGCTGGACGAGCTGTCCACCGAGCTGGGCGACAAGGTGACGATCGCCAAGCTGAACATCGACGAGAACCCGCATGTGCCGACCAAGTATGGCGTGCGCGGCATTCCCACCATGATGATCTTCAGCCAGGGCCAGGTGGCCGCGACCAAGGTGGGCGCATTGCCCAAGTCGAAGATCAAGGAATGGATCGAGTCGTCTATCTGA
PROTEIN sequence
Length: 106
MPLKVSDASFQADVLDSKKPVLVDFWAEWCGPCRMIAPALDELSTELGDKVTIAKLNIDENPHVPTKYGVRGIPTMMIFSQGQVAATKVGALPKSKIKEWIESSI*