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SCNpilot_expt_1000_bf_scaffold_2212_curated_10

Organism: scnpilot_dereplicated_Alphaproteobacteria_4

partial RP 35 / 55 BSCG 32 / 51 MC: 1 ASCG 8 / 38 MC: 1
Location: comp(8798..10192)

Top 3 Functional Annotations

Value Algorithm Source
Nitrogen regulation protein NtrX {ECO:0000313|EMBL:CDO61073.1}; TaxID=1458461 species="Bacteria; Proteobacteria; Alphaproteobacteria; Candidatus Phaeomarinobacter.;" source="Candidatus Phaeomarinobacter ectocarpi.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 65.4
  • Coverage: 454.0
  • Bit_score: 609
  • Evalue 3.00e-171
Sigma-54 factor interaction domain-containing protein; K13599 two-component system, NtrC family, nitrogen regulation response regulator NtrX similarity KEGG
DB: KEGG
  • Identity: 65.9
  • Coverage: 455.0
  • Bit_score: 603
  • Evalue 4.80e-170
  • rbh
Sigma-54 factor interaction domain-containing protein n=1 Tax=Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1) RepID=F2J0P1_POLGS similarity UNIREF
DB: UNIREF100
  • Identity: 65.9
  • Coverage: 455.0
  • Bit_score: 603
  • Evalue 1.50e-169
  • rbh

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Taxonomy

Candidatus Phaeomarinobacter ectocarpi → Candidatus Phaeomarinobacter → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1395
ATGAGCAAAAACGGATCGCTGATCGCGTCTGAAATCCTGATCGTCGACGATGAGGAGGATATCCGCGATCTGATCGCCGGCATCCTGCATGACGAGGGCTATACCACCCGCGTCGCGGGCGACTCCGAGTCCGCCCTGACCGCCTTGCGGACCCGCCGCCCGCAGCTTCTGGTGCTGGACATCTGGCTGCAGGGCAGCAAGCTGGACGGCATCGAACTGCTGGATGTGGTCAAGCGCGAGCATCCCGACCTGCCGGTGGTGATGATCTCCGGTCACGGCACCATCGAGACCGCCGTCGCCTCGATCAAGAAGGGCGCTTACGACTTCGTGGAAAAGCCCTTCAAGGCCGACCGCCTGCTGCATGTGATGGAGCGCGCCCTGGAATCGGCGCGCCTCAAGCGCGAGGTCCAGGAGCTCAAGCTCAAGACCGGCGACGAGGGCGAGTTGGTGGGCAATTCGCCCACCATCACCCAGCTGCGGGTGCTGATCGACAAGATCGCGCCCACCAACAGCCGCGTGCTGATCGCCGGTCCCGCCGGATCGGGCAAGGAAGTGGCGGCGCGCCTGATCCATGCCCGCTCGCGCCGCGCCGGCAACGCCTTCGTGGCGGTGAACTGCGCCACCATGGAGCCGGACCGGCTGGAGGCCGAACTGTTCGGCGTGGAAGGCGACGGCGCGCGCAAGACCGGCCTGTTCGAGCTGGCGCATAACGGCACGCTGTATCTGGACGAGGTGGCGGACATGCCGCTGGAGACGCAGGGCAAGATCCTGCGCGTGCTGATCGACCAGACCTTCACCCGCGTCGGCGGCCAGGGCCGCGTGCAGGTGGATGCCCGCGTCCTCTGTTCCACCACCCGCGACCTGCGCGCCGAGACCGAGGGCGGCCGGTTCCGCGAGGATCTCTATCACCGCCTGAACGTGGTGCCGGTGCGCATTCCCTCGCTGGCCGAGCGGCGCGACGACATTCCCGTGCTGGTCGGTCATTTCATGAAGCGCCTGTCGGCGGCGGCGGGCCTGCCGATGCGCCAGATCGGCGATGACGCCATGGCGGTGCTGCAGACCCATGGCTGGCCCGGCAATGTGCGCCAGCTGCGCAACATCGTGGAGCGGCTGCTGATCCTGGCCAGCGACGACGTCACCGAGGCGGTGACCGCCGAACTGCTGCCCACCGACCTCAGTTCCGGGGTGGGCGGCGCCAAGACCGGCGACCTGGTGATCTCGCTGCCGCTGCGCGAGGCGCGGGAAATCTTCGAGCGCGACTATCTGATGGCCCAGATCAACCGCTTCGGCGGCAATATCAGCCGCACCGCCGCCTTTATCGGCATGGAACGCTCGGCCCTGCACCGCAAGCTGAAATCGCTGGGCGTCGGCCCGGCGCAAGGTGTACCAAATTAA
PROTEIN sequence
Length: 465
MSKNGSLIASEILIVDDEEDIRDLIAGILHDEGYTTRVAGDSESALTALRTRRPQLLVLDIWLQGSKLDGIELLDVVKREHPDLPVVMISGHGTIETAVASIKKGAYDFVEKPFKADRLLHVMERALESARLKREVQELKLKTGDEGELVGNSPTITQLRVLIDKIAPTNSRVLIAGPAGSGKEVAARLIHARSRRAGNAFVAVNCATMEPDRLEAELFGVEGDGARKTGLFELAHNGTLYLDEVADMPLETQGKILRVLIDQTFTRVGGQGRVQVDARVLCSTTRDLRAETEGGRFREDLYHRLNVVPVRIPSLAERRDDIPVLVGHFMKRLSAAAGLPMRQIGDDAMAVLQTHGWPGNVRQLRNIVERLLILASDDVTEAVTAELLPTDLSSGVGGAKTGDLVISLPLREAREIFERDYLMAQINRFGGNISRTAAFIGMERSALHRKLKSLGVGPAQGVPN*