ggKbase home page

SCNpilot_expt_1000_bf_scaffold_6109_curated_3

Organism: scnpilot_dereplicated_Alphaproteobacteria_4

partial RP 35 / 55 BSCG 32 / 51 MC: 1 ASCG 8 / 38 MC: 1
Location: 1284..1613

Top 3 Functional Annotations

Value Algorithm Source
multidrug transporter n=1 Tax=Variovorax paradoxus RepID=UPI0003624DCB similarity UNIREF
DB: UNIREF100
  • Identity: 64.8
  • Coverage: 108.0
  • Bit_score: 152
  • Evalue 2.20e-34
small multidrug resistance protein; K03297 small multidrug resistance protein, SMR family similarity KEGG
DB: KEGG
  • Identity: 67.6
  • Coverage: 108.0
  • Bit_score: 151
  • Evalue 1.50e-34
Small Multidrug Resistance family protein {ECO:0000313|EMBL:KFJ12145.1}; TaxID=80866 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (Pseudomonas acidovorans) (Comamonas acidovorans).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 67.6
  • Coverage: 108.0
  • Bit_score: 151
  • Evalue 6.90e-34

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Delftia acidovorans → Delftia → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 330
ATGACCTGGCTCTATCTCGCGGGCGCGATCATCGCCGAAGTGATCGCAACGTCTTTCCTCAAACAGTCCGAGGGCTTCACCCAGACCTGGCCGTCGCTGATCTGCACCCTCGGCTACGGCACCGCCTTCTGGCTGCTGTCGCTGACGCTGAAGACCATGCCCACCGGTATGGCCTATGCCGCCTGGTCCGGCCTGGGCACGGTCCTGATCGTGCTGGTGGCCTGGTTGTGGCAGGGCCAGAAGCTGGACGCCCCCGCCCTGGCCGGTATCGGGCTGATCGTGGCGGGCGTGGTCGTGATGAACCTGTTCTCGCGGGCGATGACCCACTAG
PROTEIN sequence
Length: 110
MTWLYLAGAIIAEVIATSFLKQSEGFTQTWPSLICTLGYGTAFWLLSLTLKTMPTGMAYAAWSGLGTVLIVLVAWLWQGQKLDAPALAGIGLIVAGVVVMNLFSRAMTH*