ggKbase home page

You do not have permission to do that.

Please email help@ggkbase.berkeley.edu for help.

SCNpilot_expt_1000_bf_scaffold_4042_curated_11

Organism: scnpilot_dereplicated_Alphaproteobacteria_4

partial RP 35 / 55 BSCG 32 / 51 MC: 1 ASCG 8 / 38 MC: 1
Location: comp(8666..9601)

Top 3 Functional Annotations

Value Algorithm Source
Protein translocase subunit SecA {ECO:0000256|HAMAP-Rule:MF_01382, ECO:0000256|RuleBase:RU003874}; TaxID=1333998 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium MA2.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 62.9
  • Coverage: 318.0
  • Bit_score: 418
  • Evalue 8.50e-114
preprotein translocase subunit SecA; K03070 preprotein translocase subunit SecA similarity KEGG
DB: KEGG
  • Identity: 61.6
  • Coverage: 318.0
  • Bit_score: 403
  • Evalue 8.30e-110
  • rbh
Protein translocase subunit SecA n=2 Tax=Parvibaculum RepID=SECA_PARL1 similarity UNIREF
DB: UNIREF100
  • Identity: 61.6
  • Coverage: 318.0
  • Bit_score: 403
  • Evalue 2.60e-109
  • rbh

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

alpha proteobacterium MA2 → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 936
ATGCGGATTTTCGGCTCGGAGCGGATGGAATCCATTCTCACCCGCCTGGGCCTGGAGCCGGGCGAGGCCATCACCCATCCCTGGGTGAACAAGGCGCTGGAAAAGGCGCAGCACAAGGTCGAGGCGCGCAACTTCGAGATCCGCAAGAACATCCTGAAATACGACGACGTGCTCAACGACCAGCGCAAGGTCATCTTCGACCAGCGCAAGGAAATCATGTTGTCCGAGGACGTCTCCGACCAGATCGCCGACTTCCGCGAGGAAGTGGTGGAAAGCCTGGTGGAAACCCATATCCCCGAAAAGGCCTATGCCGAGCAGTGGGATGTGCAGGGCCTGCATGAGGAAGTGGACAAGATCTTCGGCCTCGACCTGCCGGTGATCGAATGGAGCAAGGAAGAAGGCATCGCCGACGAGGAAATGCGCGAGCGCATCCTCAAGGCGGTGGAGGCCCGCGCCGCCGAGCGCGCCGCCAATGTCGGCATCGAGATCACCCGCTATGTCGAAAAGGCCATCCTGCTGCAGACGCTGGACGGCCATTGGCGCGAGCATATCGTCAACATGGATCACCTGCGCCAGTATGTCGGCCTGCGCGGTTACGGCCAGCGCGATCCGCTCAACGAATACAAGAGCGAGGCGTTCGAGCTGTTCGAGTCGCTGCTGTCCACCCTGCGCCGCGACGTGGTGCGCCAGTTGATGAACGTCCAGATCCAGACCGGGCCGCAGCCGCCGCTGGAAGACACGCCCCTGCCCAGCATGTTCGCCACCCACCTGAACCCGCTGACCGGCGAGCATGAGGCCGAGCAGCCGGGCCTGTGGCCGGACGACGGCCCGGTGGACCCGAACAATCCCAAAAGCTGGGACAAGGTTCAGCGCAACGCGCCCTGTCCGTGCGGCTCCGGGAAAAAGTTCAAGCATTGCCATGGTGCCTTGACCTGA
PROTEIN sequence
Length: 312
MRIFGSERMESILTRLGLEPGEAITHPWVNKALEKAQHKVEARNFEIRKNILKYDDVLNDQRKVIFDQRKEIMLSEDVSDQIADFREEVVESLVETHIPEKAYAEQWDVQGLHEEVDKIFGLDLPVIEWSKEEGIADEEMRERILKAVEARAAERAANVGIEITRYVEKAILLQTLDGHWREHIVNMDHLRQYVGLRGYGQRDPLNEYKSEAFELFESLLSTLRRDVVRQLMNVQIQTGPQPPLEDTPLPSMFATHLNPLTGEHEAEQPGLWPDDGPVDPNNPKSWDKVQRNAPCPCGSGKKFKHCHGALT*