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SCNpilot_expt_1000_bf_scaffold_2442_curated_6

Organism: scnpilot_dereplicated_Alphaproteobacteria_4

partial RP 35 / 55 BSCG 32 / 51 MC: 1 ASCG 8 / 38 MC: 1
Location: 5145..8066

Top 3 Functional Annotations

Value Algorithm Source
PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase similarity KEGG
DB: KEGG
  • Identity: 33.4
  • Coverage: 859.0
  • Bit_score: 404
  • Evalue 6.80e-110
  • rbh
Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HQX0_PARL1 similarity UNIREF
DB: UNIREF100
  • Identity: 33.4
  • Coverage: 859.0
  • Bit_score: 404
  • Evalue 2.20e-109
  • rbh
Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) {ECO:0000313|EMBL:ABS62303.1}; Flags: Precursor;; TaxID=402881 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Parvibaculum.;" source="Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 33.4
  • Coverage: 859.0
  • Bit_score: 404
  • Evalue 3.10e-109

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Taxonomy

Parvibaculum lavamentivorans → Parvibaculum → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2922
ATGACCCTGTTCCGCCGCATCCTGCTGTTCTGCGCCGCGCTGCTCGCGCTGGCGGGCATCGCCTATGCGCAAGGGCCGGGCGCCAAGCCGGCCCAGCCCAATTTCGGCAGCACGCAGAATGTGCTGGAATTGAAAACGACGCTGACGCCCTATCACGCGCCGGGCAATCCCAGCGGCACCGAGGCGGACGGCTCGCGCTGGTACATGCTGCAGGTCAGCAACGACTCGGTGCGCCCGGCNNNNNNNNNNNNNNNNNNNNNNCAGCCGCCGCGCAGCGGGCTGCATATCCTGCCCCTGAAAACGCGGCCCGCCATCCTGGCGCTGGCCAGTTCCGATTCCGGCACGGTGGTGGAAACCGCCACCGCCTATGGCCGCCGCGCCTGGCGCGTGATCGTGCCGCCCGTCACCACCGTGGGCATCGCCCTGCGGGTGGGGTCGGCGGAAGACCCGCCCGCGCTCTATGCCTGGACCGAACCGGCGCTGGCCTCGCACAACCGCCAGCTCGCCATCTTCATCACGGCGGTGGCCTCGCTGATCGGCGCCTCGGCGCTGATCACCGGCGGCCTGGCCATTCTGATCGGCCATGCGGCGCCGCGCTGGGCGGCGGTCACGCTGCTGCTGCTGCTGTTCAGCTGGTTGTCGGGCACCGGCATGTTCGACGCCAGCCTGGCCACCCGCATCGGCGGACCCTATGGCCTGTCGGCCTTTCTGACGGCGCTGGCGCTGGCGGCGGGGATGCGGATGGCCAACGCCATCATTCCCCTTCGCGATATCTGGCCGCGCCACGAAAAGCTGTTCCAGCGCGGCGTCTTCGCCTTGGCCGGACTGGGCGCCCTGGCCTATCTGGGCCTGCCGGGCGCGGCGGTGGCGACCGATATGGTGATCGTGGCGGGCAGCATCGCGGTGGCTCTCTATCTGATCTATTGCGGGCGGCGCGGCCACAAGGCGGCGCAGGTGATCGCGCCCAGCGCCGCGGCTTTCGCGCTGGTGGCGGTGGCGGCGGCGGTGATGGCGGTCGGCGGGCTGGGCGAGAATCTCACCGGCCCGGCGGCCACCGGCGGCTTCGCGGCGGCGGGCGCGGTCCTGCTGGCGATGGCGGTGATCGCCTCGGAGGAAATCGCCGTGCTGCCCTTCCTGCACGGCTCCCATGCCGCGCGGCTGCTGGAGACGCAGATCCCCACCGACGAGGCGATCGACCATGCCACCCCGTTCAACAGCCTGGCCGCCGCCGCCATCGGCGCGGCGCATCAGGGCGTGTTCAATCTGGATTTCCGCGCCGGCCTTCTGAGCCTGTCGCAGGAGGCGGCGCAGATGGTGGGCCTCAGCAGCCATGAGATCACCTTGTCGCGCGCGGACTGGCAGGCGCATATCCATCCCGATGACCGCGAAATCTATACCAGCGCGCTGGAACAGTATCGTCCGCGGTCCGGCCTGGCCTTCCGGCTGGAGTTCCGCGCCCGTGGCGTCAGCGGCCCTTATCGCTGGCTGGAATTGCGCGCCACCATCGTCACCGAACAGGATGTGGCGTCCGATTGCCTGGGCCTTTTGTCCGACATCACCCAGCGCAAGGAAGCGGAATTCGCCGCCCAGAGCGCCGAGGCGGCGCGCAAGCGCGAGGCGGCGCTGCCGCGCGATCCGCTGACGGGGCTGGGCAACCGCGTGGCGCTGATGGAGGCGTTGGACGCGCTGGGCGGCGGCTTTCCGCGCGCGCTGTTCGTGCTGCTGGACATAGATCGTTTCAAGGCCATCCATGCCAGCCTGGGCGATGGCGGCGCCGACGTCGTGCTGCGGCAGATGGCCGAGCGCCTGGCCGGGATGGGCGAGCCGGCCCAACTGTTCCGTGTCGGCGGCGACGGCTTTGCCTTCCTGTTCGCCAATCCGCGCCGGGCGCCGCAGCCCATCGGGAACGGACTGGCGGAGGCCTGCGGCAAGGCCTATGCGGTGGACGGGCGCGAGGTCTTCGCCCCCTGCAGCGTCGGCATGGCCACCGGCGCCCAGAGCGAAGACCCGCTGGCGCTGATCAAGAATGCGGAACTGGCCCTGATCGCCGCCAAGCGGCAGGGCGGCGCCTGCGCCCGGCTGTATTCCAGCGAGATGGAGAATCTGGCGCCGGGGGATTCGGTGGCGCTGGAAAGCGAACTGCGCCACGCGCTGGCCGCCGACCAGCTGGATGTTTTCTATCAGCCCATCATCCGGCTGTCCGACCGTTCGCTGGCGGGATTCGAGGCGCTGCTGCGCTGGCAGCATCCGGTCAAGGGGCTGATCTCGCCGTCCGATTTCATCGCTCATTCCGAGGAAACCGGCCTGATCGTGGCGCTGGGCCGTTTCGCGCTGGAGCGCGCCGCCGCCGATCTGGCGCGCTGGCAACGCTATTTTCCGCTCACGCCGCCGCTGTTCGTCAGCGTGAACTTTTCCCGCCGCCAGTTGAAGGACAGCGGTTTCGAGCAGTTGCTGCGCACCGTGCTGTCGGGCAGCGGCATCGCCGAAGGCACGTTGAGTCTGGAGATCACCGAAAGCGCCGTCGCCGCCGATGCGCGGATGCCCGAACTGATGGCGCGCATCCGTGCCGCCGGGGCCGGGCTTTCCATCGACGATTTCGGAACCGGGGCTTCCACTCTCAGCGAGTTCCGCACCCTGCCGGTGGACACGGTGAAGATCGACCGGAGTTTCCTGGCCCGTCACGGCGGCACCGACATAGACACGGACGGCGAGGTCGTGCTGTCATCGGTGGTGAGCATGGCGCATGAATTGAAGCGCGCCGTGGTGGTGGAGGGCGTGGAAAGCGAGGCCGACGCCCAGTTCCTGGCGCGGATCGGATGCGAGTTCGGTCAGGGCTTTCATTTCGCGGCCGCCCTGGACGGGGCCGCGGCGTTGGAATTCATCGCCCGGCATTACAATATCGAAGCGGCTCCCGAAGCCTGA
PROTEIN sequence
Length: 974
MTLFRRILLFCAALLALAGIAYAQGPGAKPAQPNFGSTQNVLELKTTLTPYHAPGNPSGTEADGSRWYMLQVSNDSVRPXXXXXXXXQPPRSGLHILPLKTRPAILALASSDSGTVVETATAYGRRAWRVIVPPVTTVGIALRVGSAEDPPALYAWTEPALASHNRQLAIFITAVASLIGASALITGGLAILIGHAAPRWAAVTLLLLLFSWLSGTGMFDASLATRIGGPYGLSAFLTALALAAGMRMANAIIPLRDIWPRHEKLFQRGVFALAGLGALAYLGLPGAAVATDMVIVAGSIAVALYLIYCGRRGHKAAQVIAPSAAAFALVAVAAAVMAVGGLGENLTGPAATGGFAAAGAVLLAMAVIASEEIAVLPFLHGSHAARLLETQIPTDEAIDHATPFNSLAAAAIGAAHQGVFNLDFRAGLLSLSQEAAQMVGLSSHEITLSRADWQAHIHPDDREIYTSALEQYRPRSGLAFRLEFRARGVSGPYRWLELRATIVTEQDVASDCLGLLSDITQRKEAEFAAQSAEAARKREAALPRDPLTGLGNRVALMEALDALGGGFPRALFVLLDIDRFKAIHASLGDGGADVVLRQMAERLAGMGEPAQLFRVGGDGFAFLFANPRRAPQPIGNGLAEACGKAYAVDGREVFAPCSVGMATGAQSEDPLALIKNAELALIAAKRQGGACARLYSSEMENLAPGDSVALESELRHALAADQLDVFYQPIIRLSDRSLAGFEALLRWQHPVKGLISPSDFIAHSEETGLIVALGRFALERAAADLARWQRYFPLTPPLFVSVNFSRRQLKDSGFEQLLRTVLSGSGIAEGTLSLEITESAVAADARMPELMARIRAAGAGLSIDDFGTGASTLSEFRTLPVDTVKIDRSFLARHGGTDIDTDGEVVLSSVVSMAHELKRAVVVEGVESEADAQFLARIGCEFGQGFHFAAALDGAAALEFIARHYNIEAAPEA*