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SCNpilot_expt_1000_bf_scaffold_2164_curated_7

Organism: scnpilot_dereplicated_Alphaproteobacteria_4

partial RP 35 / 55 BSCG 32 / 51 MC: 1 ASCG 8 / 38 MC: 1
Location: 9725..10213

Top 3 Functional Annotations

Value Algorithm Source
Sigma-24 subunit, ECF subfamily n=1 Tax=Azospirillum amazonense Y2 RepID=G1Y2X5_9PROT similarity UNIREF
DB: UNIREF100
  • Identity: 48.8
  • Coverage: 162.0
  • Bit_score: 150
  • Evalue 1.20e-33
Sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:EGY00127.1}; TaxID=1003237 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Nitrospirillum.;" source="Nitrospirillum amazonense Y2.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 48.8
  • Coverage: 162.0
  • Bit_score: 150
  • Evalue 1.70e-33
ECF subfamily RNA polymerase sigma-70 factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily similarity KEGG
DB: KEGG
  • Identity: 36.5
  • Coverage: 156.0
  • Bit_score: 111
  • Evalue 3.40e-22

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Taxonomy

Nitrospirillum amazonense → Nitrospirillum → Rhodospirillales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 489
ATGACAGACATCCCTTTGGATCGGGCGTTTTGGATAGATGTCATAAAACGCGTATCGCGGCGGACAGGGGGCTACGCCGATACGGAAGACCTGGTGCAATCGGCTTTCGTGCGGATGCAGACCTACAGCGCGACGCGAAAGGTCGAAAATCCGGCCGCGTTCCTGGTACGCACCGCCGTCAATATCCGGCTGGACGGCTACCGGCGGGAAAAGCTGCTGGGCAAGCGCCAGTTCACGGAGAATTTCGAGGACTATGAAAATAAGGCGCCTCTCCAGGATGAGGTCATGGCCGTCCGGGCGCGTCTGGACAGGGTGAAGTCCGGGATCGAGCAGCTCCCCCAGCGCACAAGGGAGATTTTCCTGATGCATCGCCTCGACAATGTCCGCTACAGCGAGATCGCGCGGCATTACGGGATCAGCGAGAGCGCGGTGGAGAAGCATGTGGCGCGGGCGACCGCGTTCCTGATGAAATGGGCAAAGGGCTGGTAG
PROTEIN sequence
Length: 163
MTDIPLDRAFWIDVIKRVSRRTGGYADTEDLVQSAFVRMQTYSATRKVENPAAFLVRTAVNIRLDGYRREKLLGKRQFTENFEDYENKAPLQDEVMAVRARLDRVKSGIEQLPQRTREIFLMHRLDNVRYSEIARHYGISESAVEKHVARATAFLMKWAKGW*