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SCNpilot_expt_1000_bf_scaffold_8348_curated_4

Organism: scnpilot_dereplicated_Alphaproteobacteria_4

partial RP 35 / 55 BSCG 32 / 51 MC: 1 ASCG 8 / 38 MC: 1
Location: 1461..2108

Top 3 Functional Annotations

Value Algorithm Source
UPI0003CDD7A3 related cluster n=1 Tax=unknown RepID=UPI0003CDD7A3 similarity UNIREF
DB: UNIREF100
  • Identity: 49.5
  • Coverage: 214.0
  • Bit_score: 198
  • Evalue 9.00e-48
Lytic transglycosylase {ECO:0000313|EMBL:ESY84361.1}; TaxID=1287232 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC220B00.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 49.5
  • Coverage: 214.0
  • Bit_score: 198
  • Evalue 1.30e-47
putative lytic transglycosylase similarity KEGG
DB: KEGG
  • Identity: 52.2
  • Coverage: 186.0
  • Bit_score: 189
  • Evalue 1.30e-45

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Taxonomy

Mesorhizobium sp. LNHC220B00 → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 648
ATGGACCTTTTAACTCTCGCTGCGGGCTGTTCGCTGTTCATCGCGATACCCTGTTCGTCGCCCACTTTGCCACAGCAGACGCTTAAGGGCGTCTCGCGCTGGCAGCCGATAATCGCCGATGCAGCCTCCACCTTTTCCTTGCCGGAAGCCTGGGTCTCGGCGGTGATGGCCAAAGAAAGCGGTGGCCGCACGCTATTGAACGGCAAGCCGATTACCTCTAGCGCCGGCGCGATGGGACTGATGCAGGTCATGCCGGGCACCTATCAAGACCTTCGCAAGCAGTTCGGATTGGGGTCCAATCCGCATGCGCCGCGCGACAATATCCTCGCCGGAACGGCCTACTTGCAGCAGATGTATCGCCGCTATGGCTATCCGGCCATGTTCGCGGCGTACAACGCCGGACCGGGTCGCTATGAGGACTATCTGCATCGCCGCCGCCCGCTGCCCGCCGAAACCATTGCCTACATCGCGGGCATCGCGCCGGGTGCTGAAATGCGTTTTGGTGTTGAAAAAGTCACCGGAAAAAGTGGTCCGCTTAGCAAGACCGACACCGCTAAACCGGCAAAAGCCGACGCGATCTTCTTCGCGCCAAGCGCCGTAAGTGTGCTGTTCGTGACGCGCACACCACCATCTCCTGCGCCGGATTGA
PROTEIN sequence
Length: 216
MDLLTLAAGCSLFIAIPCSSPTLPQQTLKGVSRWQPIIADAASTFSLPEAWVSAVMAKESGGRTLLNGKPITSSAGAMGLMQVMPGTYQDLRKQFGLGSNPHAPRDNILAGTAYLQQMYRRYGYPAMFAAYNAGPGRYEDYLHRRRPLPAETIAYIAGIAPGAEMRFGVEKVTGKSGPLSKTDTAKPAKADAIFFAPSAVSVLFVTRTPPSPAPD*