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SCNpilot_expt_1000_bf_scaffold_16531_curated_5

Organism: scnpilot_dereplicated_Alphaproteobacteria_4

partial RP 35 / 55 BSCG 32 / 51 MC: 1 ASCG 8 / 38 MC: 1
Location: 2796..4688

Top 3 Functional Annotations

Value Algorithm Source
excinuclease ABC subunit C; K03703 excinuclease ABC subunit C similarity KEGG
DB: KEGG
  • Identity: 64.8
  • Coverage: 611.0
  • Bit_score: 807
  • Evalue 3.90e-231
  • rbh
UvrABC system protein C n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HVF7_PARL1 similarity UNIREF
DB: UNIREF100
  • Identity: 64.8
  • Coverage: 611.0
  • Bit_score: 807
  • Evalue 1.20e-230
  • rbh
UvrABC system protein C {ECO:0000256|HAMAP-Rule:MF_00203, ECO:0000256|SAAS:SAAS00088139}; Short=Protein UvrC {ECO:0000256|HAMAP-Rule:MF_00203};; Excinuclease ABC subunit C {ECO:0000256|HAMAP-Rule:MF_00203}; TaxID=402881 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Parvibaculum.;" source="Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 64.8
  • Coverage: 611.0
  • Bit_score: 807
  • Evalue 1.70e-230

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Taxonomy

Parvibaculum lavamentivorans → Parvibaculum → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1893
ATGGAACTTCCCGGCGAACAGGGCCTGACTGGTGGACAGCCCCTGAAGGGCGCGCAGCGCATCACCGCCTATCTCAAGACCCTGCCCGACGCCCCCGGCGTCTACCGGATGCTGAACGCGGCGGGCGATGTGCTGTATGTCGGCAAGGCCCGCAGCCTGAAGAAGCGCGTCACCGCCTATGCCACCGGCCGCGTCCATAGCGAGCGCCTCACCCGCATGGTGGCCGAGACGGCGGAGATGGTGTTCGTCACCACCGCCAGCGAGACCGAGGCGCTGCTGCTGGAAAGCAACCTGATCAAGCGGCTCAAGCCCCGCTACAATGTCAGCTATCGTGACGACAAGAGCTTTCCCAATATCCTGTTGCGTGAGGACCATCCCTTTCCGCAGCTTCTCAAGCATCGCGGCGCCCGCACCACCAAGGGCGTCTATTTCGGCCCCTTTGCCAGCGCGGGCGCGGTCAACCGCACCCTGAACACGTTGCAGCGGGCCTTCCTGCTGCGCTCCTGCTCGGATTCGGTGTTCGACAGCCGCACCCGTCCCTGCCTGCTGTTCCAGATCAAACGGTGCAGCGCGCCCTGCGTGGACCGTATCGACCCGGCCGGCTATCACGCGCTGGTGAAGGAAGCCGAAGGCTTCCTGAAGGGCAAAAGCCAGGCGGTGCAGGACGCACTCAAGACCGAGATGACCGCCGCCTCGGACGCGCTGGATTTCGAGACCGCGGCGCGGCTGCGCGACCGGCTGAAGGCGATGAGCCACATCCAGTCCTCGCAGGGCGTCAATCCGTCCAGCTTCGAGGAAGCCGACCTGTTCGCCGCCCACAGCGAAGGCGGCCAGACCTGCATCCAGGTGTTCTTTTTCCGGGCCGGACAGAATTGGGGCAACCGGCCCTATTTCCCCCGCCATGACCGTGACCTGCCGCTGGCCGAAGTGCTGGAGAGTTTTGTGGGCCAGTTCTATGACGACCGCCCCGCCCCGCGCCTGATCCTGACCTCCGAGGCGCTGCCGGGCCGGGCGCTGTTGGCCGCGGCGCTGTCTTCGCGCGCGGGCTTGAAAGTGGAAATCGCCCAGCCCCTGCGCGGCGAAAAACGCGAGATCATGGACCGCGCCCTGGCCAATGCCCGCGAGCAATTGGGCCGCCGCCTGGCCGAAAACAGCGCCCAGACCCAGTTGCTGGAAGGGGTGGCCGATGTCTTCGGGCTGGACCAGCCGCCCCGCCGCATCGAGGTCTATGACAATTCCCACATCCAGGGCGCCCATGCCCTGGGGGCCTTCATCGTGGCCGGGCCGGACGGCTTCGAGAAAGCCCAGTACCGCAAGTTCAACATCAAGACCGCCGACCTGGCCCCCGGCGACGATTACGCCATGATGCGCGAGGTGCTGACCCGCCGCTTTGCCCGCATGGTGAAGGAGGAAGCCGCCCCGGGCCCGGACTCGCGCTGGAAGCGTCCCGAACTGGTGCTGATCGACGGCGGGCCGGGCCAGCTTTCGGTCGCCTGCCAGGTCTTTGCCGATCTGGGGGTGGAGGATGTGACGCTGGTGGGCATCTCCAAGGGGCCGGACCGCGATGCGGGCCGCGAGCATTTCTATATGCCGGGCCGCGAGCCCTTCCGCCTCGATCCCAAAAGCCCGGTGCTGTATTACCTGCAACGGCTGCGCGACGAGGCGCACCGTTTCGTGATCGGCGGCCACCGCAAAAAGCGCAGCGCCGCCATCGGGGCCAATCCGCTGGACGAAATCGCCGGGGTGGGAGCGAACCGCAAGCGGGCGCTGCTCCAGCATTTCGGCTCGGCCCGCGCCGTGGCCGGGGCCAGCCTGGCGGATTTGGCGGCGGTGGATGGGGTCAGCGAGACACTGGCCCGGAAAATCTTCGATTTCTTCCATCCCGGCGGGTGA
PROTEIN sequence
Length: 631
MELPGEQGLTGGQPLKGAQRITAYLKTLPDAPGVYRMLNAAGDVLYVGKARSLKKRVTAYATGRVHSERLTRMVAETAEMVFVTTASETEALLLESNLIKRLKPRYNVSYRDDKSFPNILLREDHPFPQLLKHRGARTTKGVYFGPFASAGAVNRTLNTLQRAFLLRSCSDSVFDSRTRPCLLFQIKRCSAPCVDRIDPAGYHALVKEAEGFLKGKSQAVQDALKTEMTAASDALDFETAARLRDRLKAMSHIQSSQGVNPSSFEEADLFAAHSEGGQTCIQVFFFRAGQNWGNRPYFPRHDRDLPLAEVLESFVGQFYDDRPAPRLILTSEALPGRALLAAALSSRAGLKVEIAQPLRGEKREIMDRALANAREQLGRRLAENSAQTQLLEGVADVFGLDQPPRRIEVYDNSHIQGAHALGAFIVAGPDGFEKAQYRKFNIKTADLAPGDDYAMMREVLTRRFARMVKEEAAPGPDSRWKRPELVLIDGGPGQLSVACQVFADLGVEDVTLVGISKGPDRDAGREHFYMPGREPFRLDPKSPVLYYLQRLRDEAHRFVIGGHRKKRSAAIGANPLDEIAGVGANRKRALLQHFGSARAVAGASLADLAAVDGVSETLARKIFDFFHPGG*