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SCNpilot_expt_1000_bf_scaffold_10432_curated_7

Organism: scnpilot_dereplicated_Alphaproteobacteria_4

partial RP 35 / 55 BSCG 32 / 51 MC: 1 ASCG 8 / 38 MC: 1
Location: 5408..6202

Top 3 Functional Annotations

Value Algorithm Source
thymidylate synthase; K00560 thymidylate synthase [EC:2.1.1.45] similarity KEGG
DB: KEGG
  • Identity: 76.9
  • Coverage: 264.0
  • Bit_score: 434
  • Evalue 2.90e-119
  • rbh
Thymidylate synthase n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=TYSY_PARL1 similarity UNIREF
DB: UNIREF100
  • Identity: 76.9
  • Coverage: 264.0
  • Bit_score: 434
  • Evalue 9.10e-119
  • rbh
Thymidylate synthase {ECO:0000255|HAMAP-Rule:MF_00008}; Short=TS {ECO:0000255|HAMAP-Rule:MF_00008};; Short=TSase {ECO:0000255|HAMAP-Rule:MF_00008};; EC=2.1.1.45 {ECO:0000255|HAMAP-Rule:MF_00008};; TaxID=402881 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Parvibaculum.;" source="Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 76.9
  • Coverage: 264.0
  • Bit_score: 434
  • Evalue 1.30e-118

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Taxonomy

Parvibaculum lavamentivorans → Parvibaculum → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 795
ATGCGCCAATATCTCGATCTGCTGAAGCTCGTCCGCGACACCGGGGTGGAAAAGACCGGCCGGACCGGCACCGGCACGCGGTCGATTTTCGGCCATCAGATGCGCTTCGACCTGGCCGAGGGCTTTCCCCTGGTCACCACCAAGAAGCTGCACCTGAAATCCATCATCTATGAACTGCTCTGGTTCCTGCGCGGCGAAACCAATGTGCGCTGGTTGCAGGCGCATGGCGTCACCATCTGGGACGAATGGGCCGACGCCAACGGCGAATTGGGCCCGGTTTACGGCTATCAGTGGCGCAGCTGGCCCACCCGCACCGACGGCACCATCGACCAGATCGCCAACCTGGTGCGCGATATCCGCGCCAACCCGGATTCGCGCCGTCTGATCGTGACCGCCTGGAACCCGGCCGACGTGCCCAAGATGGCGCTGCCGCCCTGCCACTGCCTGTTCCAGTTCTATGTCGCGGAGGGACGGTTGTCCTGCCAGCTTTACCAGCGCAGCGCCGACATCTTCCTGGGCGTGCCCTTCAACATCGCCTCTTACGCCCTTCTGACCCTGATGGTGGCGCAGGTGACGGGGCTGAAGCCCGGCCATTTCGTCCATAGCCTGGGCGACGCCCATCTCTATCTGAACCATCTGGATCAGGCGGACGCGCAGCTGTCCCGGCGGCCCCATCCCCTGCCGGTGATGCGGTTGAACTCGGCCGTGACGGACATATTCGCCTTCCGGTACGGGGATTTCAGCCTGGAGAATTACCAGGCCGAACCCACGATCAAGGCGCCAATCGCCGTCTGA
PROTEIN sequence
Length: 265
MRQYLDLLKLVRDTGVEKTGRTGTGTRSIFGHQMRFDLAEGFPLVTTKKLHLKSIIYELLWFLRGETNVRWLQAHGVTIWDEWADANGELGPVYGYQWRSWPTRTDGTIDQIANLVRDIRANPDSRRLIVTAWNPADVPKMALPPCHCLFQFYVAEGRLSCQLYQRSADIFLGVPFNIASYALLTLMVAQVTGLKPGHFVHSLGDAHLYLNHLDQADAQLSRRPHPLPVMRLNSAVTDIFAFRYGDFSLENYQAEPTIKAPIAV*