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SCNpilot_expt_1000_bf_scaffold_10190_curated_6

Organism: scnpilot_dereplicated_Alphaproteobacteria_4

partial RP 35 / 55 BSCG 32 / 51 MC: 1 ASCG 8 / 38 MC: 1
Location: comp(6167..6550)

Top 3 Functional Annotations

Value Algorithm Source
iojap family protein; K09710 ribosome-associated protein similarity KEGG
DB: KEGG
  • Identity: 56.8
  • Coverage: 125.0
  • Bit_score: 147
  • Evalue 3.40e-33
Ribosomal silencing factor RsfS n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HT63_PARL1 similarity UNIREF
DB: UNIREF100
  • Identity: 56.8
  • Coverage: 125.0
  • Bit_score: 147
  • Evalue 1.10e-32
Ribosomal silencing factor RsfS {ECO:0000256|HAMAP-Rule:MF_01477}; TaxID=1333998 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium MA2.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 58.7
  • Coverage: 121.0
  • Bit_score: 147
  • Evalue 1.20e-32

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Taxonomy

alpha proteobacterium MA2 → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 384
GTGAAAAAACCCGCCCGCAAGACGGCGGCCGCCGCGCCGGTCAAAAAGGCCGCGCCGCAGAGCGAGCTTTTGAAGCGCATCCTGGCCTCGCTGGACGACGACAAGGCGGACAACATCGTCACCATTGATCTGGAAGGCCGTTCGGCCCTGTGCGATGCGGCGGTGGTGGCATCGGGCCGTTCCTCGCGCCATGTCTCGGCCATCGCCGAACACCTGGCCCGCCGCCTGAAGGACGGCGGCTATGGCACCCGCCCGATCACCGGCCAGGCCCAGGGCGACTGGGTGCTGGTGGATGCGGGCGATGTGATCGTGCATCTGTTCCGCCCCGAAGTGCGCGACTATTACGACCTGGAAGGCATGTGGTCGGTCGGCGGCCGCAAATAG
PROTEIN sequence
Length: 128
VKKPARKTAAAAPVKKAAPQSELLKRILASLDDDKADNIVTIDLEGRSALCDAAVVASGRSSRHVSAIAEHLARRLKDGGYGTRPITGQAQGDWVLVDAGDVIVHLFRPEVRDYYDLEGMWSVGGRK*