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SCNpilot_expt_1000_bf_scaffold_5593_curated_1

Organism: scnpilot_dereplicated_Alphaproteobacteria_4

partial RP 35 / 55 BSCG 32 / 51 MC: 1 ASCG 8 / 38 MC: 1
Location: comp(1..138)

Top 3 Functional Annotations

Value Algorithm Source
Transcription termination factor Rho {ECO:0000256|HAMAP-Rule:MF_01884}; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_01884};; ATP-dependent helicase Rho {ECO:0000256|HAMAP-Rule:MF_01884}; TaxID=1245923 species="Bacteria; Cyanobacteria; Nostocales; Scytonemataceae; Scytonema.;" source="Scytonema millei VB511283.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 82.6
  • Coverage: 46.0
  • Bit_score: 80
  • Evalue 6.20e-13
Transcription termination factor Rho n=1 Tax=Rubellimicrobium thermophilum DSM 16684 RepID=S9S2J2_9RHOB similarity UNIREF
DB: UNIREF100
  • Identity: 78.3
  • Coverage: 46.0
  • Bit_score: 79
  • Evalue 9.90e-13
rho; transcription termination factor Rho; K03628 transcription termination factor Rho similarity KEGG
DB: KEGG
  • Identity: 78.3
  • Coverage: 46.0
  • Bit_score: 78
  • Evalue 6.90e-13

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Taxonomy

Scytonema millei → Scytonema → Nostocales → Cyanobacteria → Bacteria

Sequences

DNA sequence
Length: 138
ATGGAGCTGGACGACCCCACCATCAAGGACAAGACCGGCCGGGTCATCGACATCGTGGCGCCGCAGGGCATGGGCCAGCGCGCCCTGATCACCGCGCCGCCGCGCACCGGCAAGACGGTGATCCTGCAGAACATCGCC
PROTEIN sequence
Length: 46
MELDDPTIKDKTGRVIDIVAPQGMGQRALITAPPRTGKTVILQNIA