ggKbase home page

SCNpilot_expt_1000_bf_scaffold_2596_curated_7

Organism: scnpilot_dereplicated_Alphaproteobacteria_4

partial RP 35 / 55 BSCG 32 / 51 MC: 1 ASCG 8 / 38 MC: 1
Location: comp(7750..7968)

Top 3 Functional Annotations

Value Algorithm Source
SirA family protein; K04085 tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-] similarity KEGG
DB: KEGG
  • Identity: 50.9
  • Coverage: 57.0
  • Bit_score: 64
  • Evalue 2.10e-08
SirA family protein n=1 Tax=Ruegeria pomeroyi (strain ATCC 700808 / DSM 15171 / DSS-3) RepID=Q5LS74_RUEPO similarity UNIREF
DB: UNIREF100
  • Identity: 50.9
  • Coverage: 57.0
  • Bit_score: 64
  • Evalue 6.80e-08
SirA family protein {ECO:0000313|EMBL:AAV95173.1}; TaxID=246200 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Ruegeria.;" source="Ruegeria pomeroyi (strain ATCC 700808 / DSM 15171 / DSS-3); (Silicibacter pomeroyi).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 50.9
  • Coverage: 57.0
  • Bit_score: 64
  • Evalue 9.60e-08

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Ruegeria pomeroyi → Ruegeria → Rhodobacterales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 219
ATGCCCGCCTTGCTGGCGCGCAAAGCCCTGGCGCGGCTGGCGCCGGGCGCATTACTGACCGTGCTGGCCGACGACCCGCTGGCGGTGGTGGATATTCCACATATGTGCAACCGCGAAGGCCATGCCGTGAACGGCGTGACCCGTCGCGAAGATCACAGCGAATTCCGTCTCACGGCCGGGCCGGCGGACGCTCATTCCGAGGCCCAGTCTTCGGCATGA
PROTEIN sequence
Length: 73
MPALLARKALARLAPGALLTVLADDPLAVVDIPHMCNREGHAVNGVTRREDHSEFRLTAGPADAHSEAQSSA*