ggKbase home page

SCNpilot_expt_1000_bf_scaffold_5276_curated_18

Organism: scnpilot_dereplicated_Alphaproteobacteria_4

partial RP 35 / 55 BSCG 32 / 51 MC: 1 ASCG 8 / 38 MC: 1
Location: comp(8487..8678)

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L23; K02892 large subunit ribosomal protein L23 similarity KEGG
DB: KEGG
  • Identity: 69.4
  • Coverage: 62.0
  • Bit_score: 89
  • Evalue 3.20e-16
50S ribosomal protein L23 n=1 Tax=Parvularcula bermudensis (strain ATCC BAA-594 / HTCC2503 / KCTC 12087) RepID=E0TDC0_PARBH similarity UNIREF
DB: UNIREF100
  • Identity: 69.4
  • Coverage: 62.0
  • Bit_score: 89
  • Evalue 1.00e-15
50S ribosomal protein L23 {ECO:0000256|HAMAP-Rule:MF_01369, ECO:0000256|RuleBase:RU003935}; TaxID=314260 species="Bacteria; Proteobacteria; Alphaproteobacteria; Parvularculales; Parvularculaceae; Parvularcula.;" source="Parvularcula bermudensis (strain ATCC BAA-594 / HTCC2503 / KCTC; 12087).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 69.4
  • Coverage: 62.0
  • Bit_score: 89
  • Evalue 1.40e-15

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Parvularcula bermudensis → Parvularcula → Parvularculales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 192
GACGCCACCAAGCCCGCGATCGCCAAGGCGGTCGCCGACCTGTTCAAGGTCAAGGTCAAGGCGGTGAACACGGTGGTCGTGAAGGGCAAGCGCAAGGCGGCCCGCGGCAAGGCCTATACGCGTTCGGATATCAAGAAAGCGATCGTGACCCTGGAAGAGGGCCACCAGATCGACATCACGACGGGTCTCTAA
PROTEIN sequence
Length: 64
DATKPAIAKAVADLFKVKVKAVNTVVVKGKRKAARGKAYTRSDIKKAIVTLEEGHQIDITTGL*