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SCNpilot_expt_1000_bf_scaffold_8495_curated_11

Organism: scnpilot_dereplicated_Alphaproteobacteria_4

partial RP 35 / 55 BSCG 32 / 51 MC: 1 ASCG 8 / 38 MC: 1
Location: 8531..9718

Top 3 Functional Annotations

Value Algorithm Source
mandelate racemase/muconate lactonizing protein; K12661 L-rhamnonate dehydratase [EC:4.2.1.90] similarity KEGG
DB: KEGG
  • Identity: 84.6
  • Coverage: 395.0
  • Bit_score: 701
  • Evalue 1.90e-199
  • rbh
L-rhamnonate dehydratase n=1 Tax=Caulobacter segnis (strain ATCC 21756 / DSM 7131 / JCM 7823 / NBRC 15250 / LMG 17158 / TK0059) RepID=D5VGC7_CAUST similarity UNIREF
DB: UNIREF100
  • Identity: 84.6
  • Coverage: 395.0
  • Bit_score: 701
  • Evalue 6.00e-199
  • rbh
L-rhamnonate dehydratase {ECO:0000256|HAMAP-Rule:MF_01288}; Short=RhamD {ECO:0000256|HAMAP-Rule:MF_01288};; EC=4.2.1.90 {ECO:0000256|HAMAP-Rule:MF_01288};; TaxID=509190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter segnis (strain ATCC 21756 / DSM 7131 / JCM 7823 / NBRC; 15250 / LMG 17158 / TK0059) (Mycoplana segnis).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 84.6
  • Coverage: 395.0
  • Bit_score: 701
  • Evalue 8.40e-199

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Taxonomy

Caulobacter segnis → Caulobacter → Caulobacterales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1188
GTGGCATTTCCGAAGATCAGGGCGGTGCGCGCCTTTGTGGTGCGCGGCGGCGGCGCCGACTATCACGACCAGGGCGGCGGCCACTGGATCGACGATCATATCGCCACCCCGATGGCGCGCTATCCCGAATACCGCCAGAGCCGCCAGAGTTTCGGCATCAATGTGCTGGGCACGCTGGTGGTGGAGATCGAGGCCGAGAACGGCGTCACCGGCTTTGCCGTGACCACGGGCGGCGAGCCTGCCTGCTATATCGTGGAAAAGCACCTGGCCCGTTTCCTGGAAGGGCGCGATCCGTCGCAGGTCGAGAAGATCTGGGACCAGATGTATTTCTCCACCCAGTATTACGGGCGCAAGGGGCTGGTGATCAACGCCATCAGCGGCGTGGACCTGGCGCTGTGGGACCTTTTGGGCAAGCTGCGCGACGAGCCGGTGCATCAGCTTCTGGGCGGTGCGGTGCGTGACGAGCTGGTTTTCTATGCCACCGGCGCGCGCCCGGACCTGGCCAGGCAGATGGGCTTTATCGGCGGCAAGATGCCCCTGCATCACGGCCCCGCCGAAGGCGAGGAGGGATTGAAAAAGGCCCTGGCCGAGATCGCCGTGATGCGCGAACGGGTCGGCCCGGATTTCTGGCTGATGCTGGATTGCTGGATGGCACTGGACCTGAATTACGCCACCCNNNNNNNNNNNNNNNNNNNNNNNNNNTCCGGCCTGAAATGGATCGAGGAGGCGTTGTCGCCCGACGATTACTGGGGCTATCGCGACGTCAAGAAAGCGGTGCCGCCCGGGATGCTGGTGACGACCGGCGAGCATGACGCCACCCGCTGGGGGTTCCGCATGTTGCTGGAGATGGACTGCTGCGACATCATCCAGCCCGATGTGGGCTGGTGCGGCGGCGTCACCGAACTGATCAAGATCGCCAACCTGGCCGAAAGCCACGGCAAGCTGATGGTGCCGCACGGCTCGTCGGTCTATTCCTATCATTTCGTCATCACCCGGCATAACTCGCCCTTCGCCGAGTTCCTGATGATGGCGCCCCAGGCCGACAAGGTGGTGCCGATGTTCGCCCCGCAATTGCTGGGCGAGCCGGTGCCGGAGAATGGCCGCATCAAGCTGTCGGCGCTGGACAGGCCGGGCTTCGGTGTCGAGTTGAACCGCGAGGTCAAGCTGCACAGACCCTATCCCAGATGA
PROTEIN sequence
Length: 396
VAFPKIRAVRAFVVRGGGADYHDQGGGHWIDDHIATPMARYPEYRQSRQSFGINVLGTLVVEIEAENGVTGFAVTTGGEPACYIVEKHLARFLEGRDPSQVEKIWDQMYFSTQYYGRKGLVINAISGVDLALWDLLGKLRDEPVHQLLGGAVRDELVFYATGARPDLARQMGFIGGKMPLHHGPAEGEEGLKKALAEIAVMRERVGPDFWLMLDCWMALDLNYATXXXXXXXXXSGLKWIEEALSPDDYWGYRDVKKAVPPGMLVTTGEHDATRWGFRMLLEMDCCDIIQPDVGWCGGVTELIKIANLAESHGKLMVPHGSSVYSYHFVITRHNSPFAEFLMMAPQADKVVPMFAPQLLGEPVPENGRIKLSALDRPGFGVELNREVKLHRPYPR*