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SCNpilot_expt_1000_bf_scaffold_4794_curated_4

Organism: scnpilot_dereplicated_Shinella_1

near complete RP 40 / 55 MC: 4 BSCG 43 / 51 MC: 6 ASCG 11 / 38 MC: 1
Location: 2483..3439

Top 3 Functional Annotations

Value Algorithm Source
LysR-family transcriptional regulator n=1 Tax=uncultured bacterium RepID=K2AFD1_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 71.0
  • Coverage: 314.0
  • Bit_score: 452
  • Evalue 3.00e-124
  • rbh
LysR-family transcriptional regulator {ECO:0000313|EMBL:EKD60391.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 71.0
  • Coverage: 314.0
  • Bit_score: 452
  • Evalue 4.20e-124
transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 50.9
  • Coverage: 316.0
  • Bit_score: 313
  • Evalue 6.80e-83
  • rbh

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Taxonomy

uncultured bacterium → Bacteria

Sequences

DNA sequence
Length: 957
ATGGACATCCGGCATTTGCGGTACTTCATTGCGATCTCGGAAGAGCGCTCCCTGTCGGCCGCATCGCAGCGTCTCGGCGTGGCGCAGCCTTCCCTTTCCCAGCATGTGATCAGGCTCGAGGAAGAGCTCGGGGTTCCCCTGATGGAACGATCGCCACGGGGAATCGTGCTGACGGACGAGGGCCAGCTTCTCGTGCGCCATGCCCGGGAGATATGCCGCAATCTCGACCAGTGCATCACGGAAATGCGCGAGGCGGGCGGAGCCGTGCGGGGTCAGGTGACCTTCGGTCTGCCGCCGTCGATCTCCATGGTCATGTCCGTTCCCCTGGCGGAAACCGTCCGCATCGATCTGCCGTCCGTCCGCCTGCAGGCCATCGAGGCGATGAGCGGCTATATCCGCACATGGCTGGAGGACGGCACGGTGGAAATGGCGTTTCTCTACTACATCGACAGGAAGGACCAGTTCCGGGCGCGCCATCTCCTGGACGAGCAGCTCTGTTTCTTCGCCGCCCCTGATAACTGGCCGCTCGACACAAAGCCGGGCGTGCCAGTGCGCCTTGCCGATATCGCCGGGCTGGATCTGATCCTGCCCTCTCCCAGCCATGGCCTGACCCGGACCATTCAGCGTCACGCCACGGAAAAGGGCATCGAGCTGAACGTCGTCATCGAAATGGATGCGATGACCCAGATCAAGGAACTGGTCGCCCGCGGATCCGGATTTGCCATATTCGCGCCCGCCGCGGCGCACGATTTCGTCGCGCGCGGCGAGCTGGTGAAGTCCCCGATCATCGAACCGTCGATCTGGAGACCGGTCTATCTCGTGTCGAACCCGGCGCGCCCGATGAGCAGGGCCTGCCAGGCCGTGGAGAAGATCACCCTGACCGTGGCCCGCGATCTCGTCAGGCGCGGCATATGGGAAGGCAAGCTGACGCCCGAGCTCGAAGCGTTCGAAGGCTAG
PROTEIN sequence
Length: 319
MDIRHLRYFIAISEERSLSAASQRLGVAQPSLSQHVIRLEEELGVPLMERSPRGIVLTDEGQLLVRHAREICRNLDQCITEMREAGGAVRGQVTFGLPPSISMVMSVPLAETVRIDLPSVRLQAIEAMSGYIRTWLEDGTVEMAFLYYIDRKDQFRARHLLDEQLCFFAAPDNWPLDTKPGVPVRLADIAGLDLILPSPSHGLTRTIQRHATEKGIELNVVIEMDAMTQIKELVARGSGFAIFAPAAAHDFVARGELVKSPIIEPSIWRPVYLVSNPARPMSRACQAVEKITLTVARDLVRRGIWEGKLTPELEAFEG*