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SCNpilot_expt_1000_bf_scaffold_4676_curated_6

Organism: scnpilot_dereplicated_Shinella_1

near complete RP 40 / 55 MC: 4 BSCG 43 / 51 MC: 6 ASCG 11 / 38 MC: 1
Location: 3541..4446

Top 3 Functional Annotations

Value Algorithm Source
Phosphonate ABC transporter periplasmic phosphonate binding protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CX81_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 93.7
  • Coverage: 301.0
  • Bit_score: 570
  • Evalue 1.20e-159
  • rbh
Phosphonate ABC transporter periplasmic phosphonate binding protein {ECO:0000313|EMBL:EYR77503.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 93.7
  • Coverage: 301.0
  • Bit_score: 570
  • Evalue 1.70e-159
phoD; putative phosphate/phosphonate ABC transporter,periplasmic substrate-binding protein; K02044 phosphonate transport system substrate-binding protein similarity KEGG
DB: KEGG
  • Identity: 87.7
  • Coverage: 301.0
  • Bit_score: 539
  • Evalue 9.40e-151
  • rbh

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 906
ATGCTGAAGAACGTTCTTCTGGGCGCCGTCGCGCTCATCGCGCTTGCCGGCCATGTCCAGGCCGAAGACCTCAAGGAATTCCGCGTCGGCATCATCGGCGGCGAGAACGAAGCGGACCGCCTGCGCAACTACCAGTGCCTCGGCGACCACCTGAAGACCGAGCTTGGCTTCGAGAAGGTCTCTTTCTTCCCGGCCGCCGACTATGACGGCGTCATCCAGGGCCTGCTCGGCGGCACGCTCGATTATGCCGAACTCGGCGCTTCCGGCTATGCCAAGATCTACCTCGCCAACGCAAACGCCGTCGAGCCTATCCTGACGACCGTCCAGACGGACGGGTCGACCGGCTACCACTCGATCATGGTCGCCCGCAAGGATTCCGGCATCACCAAGCTCGAAGACCTCAAGGGCAAGAAGCTCGGCTTTGCCGATCCGGACTCGACCTCGGGCTACCTCGTCCCGCTCGTCACGCTGCCGGAAGCCATCGGCAGCCCGGTCAAGGAATACTTTGCCGAGACCGGCTTCGGCGGCGGCCACGAGAACCTCGTCCTCGAAGTGCTGAAGGGCACCTTCGACGCCGGCACGACCTTCGGCTCCGGCGTCGGCGAGTGGAAGGACGGCTACACTTCCGGCAACCTGCACAAGATGGTCGAGAAGGGCATTCTCGACATGAACGATCTCGTCGAGCTCTGGAAGTCGCCGCTGATCCCGAACGGCCCGATCGTCGTTCGCACCTCCATGGCCGACGAGACGAAGGCGAAGTTCAAGCAGTTCATGCTCGACCTGCCGAAGAAGGACGCCGCCTGCTTCTCCGCCGTCATGGGCGGCGACTACACTTCCTTTACGGAAGTCAATGTCGACTTCTACAAGCCGATCATCGAGGCCCGCAAGGCAACGATCGGCGGCTGA
PROTEIN sequence
Length: 302
MLKNVLLGAVALIALAGHVQAEDLKEFRVGIIGGENEADRLRNYQCLGDHLKTELGFEKVSFFPAADYDGVIQGLLGGTLDYAELGASGYAKIYLANANAVEPILTTVQTDGSTGYHSIMVARKDSGITKLEDLKGKKLGFADPDSTSGYLVPLVTLPEAIGSPVKEYFAETGFGGGHENLVLEVLKGTFDAGTTFGSGVGEWKDGYTSGNLHKMVEKGILDMNDLVELWKSPLIPNGPIVVRTSMADETKAKFKQFMLDLPKKDAACFSAVMGGDYTSFTEVNVDFYKPIIEARKATIGG*