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SCNpilot_expt_1000_bf_scaffold_19590_curated_4

Organism: scnpilot_dereplicated_Shinella_1

near complete RP 40 / 55 MC: 4 BSCG 43 / 51 MC: 6 ASCG 11 / 38 MC: 1
Location: comp(2045..2434)

Top 3 Functional Annotations

Value Algorithm Source
LrgB family protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CLZ6_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 93.0
  • Coverage: 129.0
  • Bit_score: 228
  • Evalue 2.90e-57
LrgB family protein {ECO:0000313|EMBL:EYR79249.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 93.0
  • Coverage: 129.0
  • Bit_score: 228
  • Evalue 4.00e-57
LrgB family protein similarity KEGG
DB: KEGG
  • Identity: 65.9
  • Coverage: 129.0
  • Bit_score: 165
  • Evalue 1.20e-38

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 390
CTCGTCATGGGCAGCCTCGCGGCGGTGGGCTCGACGGTGTTCCTCAGCCATCTCTTCGGGTTCACGCCGGCCGTCGTCGCTTCGCTCGCGCCGAAATCGACCACCGCCGCCGTCGCCATGGCGATCTCCTCCGGCCTCAAGGGCGATCCGGCGCTGACGGCCGCGGTCGTCGTGCTCACCGGCATCTGCGGGGCGATCGTCGTGACGCCGATGATGAACGCCATGCGCATCCGGGACTACAGCGCGCGCGGCTTTGCCGTGGGGCTCGCCTCCCACGGCATCGGCACCGCGCGGGCCTATTCGGTGGACCCGGTGGCCGGGCTGTTCTCCGGGATCGCCATGGGCCTCAACGCCGTGCTGACCTCGCTGATCGTCCACCTGTTCCTGTGA
PROTEIN sequence
Length: 130
LVMGSLAAVGSTVFLSHLFGFTPAVVASLAPKSTTAAVAMAISSGLKGDPALTAAVVVLTGICGAIVVTPMMNAMRIRDYSARGFAVGLASHGIGTARAYSVDPVAGLFSGIAMGLNAVLTSLIVHLFL*