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SCNpilot_expt_1000_bf_scaffold_51245_curated_2

Organism: scnpilot_dereplicated_Shinella_1

near complete RP 40 / 55 MC: 4 BSCG 43 / 51 MC: 6 ASCG 11 / 38 MC: 1
Location: comp(91..234)

Top 3 Functional Annotations

Value Algorithm Source
Putative transcriptional regulator protein, GntR family n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CM30_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 85.1
  • Coverage: 47.0
  • Bit_score: 82
  • Evalue 1.20e-13
Putative transcriptional regulator protein, GntR family {ECO:0000313|EMBL:EYR77512.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 85.1
  • Coverage: 47.0
  • Bit_score: 82
  • Evalue 1.70e-13
GntR family transcriptional regulator; K02043 GntR family transcriptional regulator, phosphonate transport system regulatory protein similarity KEGG
DB: KEGG
  • Identity: 63.6
  • Coverage: 44.0
  • Bit_score: 64
  • Evalue 1.40e-08

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 144
ATGCGCCAGCTCAAGCTCTCTCCAGGCGCCATCATCCTCGTCGCCATGGCCGTCAACACCGACCTCGACGGCACGCCGATCCAGTTCTCCCGCACCCGCTTCGCCGCCGACCGCGTCAAGTTGACGGTGGAGCCGGACGCCTGA
PROTEIN sequence
Length: 48
MRQLKLSPGAIILVAMAVNTDLDGTPIQFSRTRFAADRVKLTVEPDA*